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no decoys created #19

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carusobpaula opened this issue Sep 5, 2022 · 2 comments
Open

no decoys created #19

carusobpaula opened this issue Sep 5, 2022 · 2 comments

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@carusobpaula
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The message "Creating decoys structures" stays for too long and no decoy is created, nothing happens after this message. Do you have a clue what can be going on? Thank you!

@carusobpaula
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ps: running it in google colab.

@jeffreyruffolo
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jeffreyruffolo commented Sep 7, 2022

Hi, any chance you can share the sequence you are trying to predict? I expect that if the notebook is failing to produce decoys then Rosetta is unable to find a solution. This could happen if the input sequence isn't truncated to just the Fv, or otherwise looks unfamiliar to the model (in these cases you usually get gibberish predictions that can't be minimized by Rosetta).

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