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Convert GFS DDTs from blocked data structures to contiguous arrays (now also includes https://github.com/NOAA-EMC/fv3atm/pull/752) #798

Merged
merged 108 commits into from
Aug 8, 2024
Merged

Convert GFS DDTs from blocked data structures to contiguous arrays (now also includes https://github.com/NOAA-EMC/fv3atm/pull/752) #798

merged 108 commits into from
Aug 8, 2024

Commits on Dec 6, 2023

  1. get 'uppercase' from mpp_mod in io/module_wrt_grid_comp.F90

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Commits on Dec 7, 2023

  1. Add GCC-based CI build

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  2. note dep build time in GCC CI

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  3. Update CMakeLists.txt

    @AlexanderRichert-NOAA
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  4. Update spack.yaml

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Commits on Dec 8, 2023

  1. Update CMakeLists.txt

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  2. Update spack.yaml

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Commits on Dec 11, 2023

  1. switch to use fms implementation of mpp

    @BrianCurtis-NOAA
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Commits on Dec 22, 2023

  1. Update .gitmodules and submodule pointer for ccpp-framework for code … 

    …review and testing
    @climbfuji
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  2. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support
    @climbfuji
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Commits on Dec 26, 2023

  1. Update submodule pointer for ccpp-framework

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Commits on Dec 27, 2023

  1. Update .gitmodules and submodule pointers for ccpp-framework and ccpp… 

    …-physics
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  2. Bug fix in io/module_wrt_grid_comp.F90 to compile on macOS with apple… 

    …-clang
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  3. Fix typo in .gitmodules

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Commits on Dec 28, 2023

  1. Update submodule pointer for ccpp-framework

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  2. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support
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  3. Update submodule pointer for ccpp-framework

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  4. Clean up comments in io/module_wrt_grid_comp.F90

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Commits on Jan 4, 2024

  1. Merge remote-tracking branch 'upstream/develop' into use_fms_mpp

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  2. revert stoch phys name change

    @AlexanderRichert-NOAA
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  3. Merge remote-tracking branch 'brian/use_fms_mpp' into add_ci

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  4. Update GCC.yml (remove fms recipe workaround)

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  5. rename stochastic_physics repo dir->stochastic_physics_repo

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  6. remove apt mpi installation

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  7. increment cache key

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Commits on Jan 9, 2024

  1. Merge remote-tracking branch 'noaaemc/develop' into add_ci

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Commits on Jan 10, 2024

  1. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support
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  2. Update submodule pointer for ccpp-framework

    @climbfuji
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  3. Transition to chunked arrays step 1: add variables to hold chunk size… 

    … information
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Commits on Jan 11, 2024

  1. Merge remote-tracking branch 'origin/develop' into add_ci

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Commits on Jan 12, 2024

  1. Add CI testing w/CTest & gcovr, + initial unit tests 

    Create separate developer.yml CI workflow
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  2. Update PR template

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  3. Merge remote-tracking branch 'noaaemc/develop' into add_unit_testing

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Commits on Jan 13, 2024

  1. complete test_fv3_io_def.F90

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  2. Update pull_request_template.md

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  3. fix testrun build path in GCC.yml

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  4. catch one more case in post_nems_routine unit test

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  5. fix test_post_nems_routines.F90

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  6. Update CMakeLists.txt

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  7. simplify test_fv3_io_def.F90

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  8. Update .gitmodules and submodule pointer for ccpp-framework for code … 

    …review and testing
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Commits on Jan 19, 2024

  1. Convert GFS_grid DDT: use contiguous arrays instead of blocked data s… 

    …tructures
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  2. Merge remote-tracking branch 'noaaemc/develop' into add_unit_testing

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  3. Re-integrate developer.yml into GCC.yml

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  4. refine cache condition in GCC.yml

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  5. fix up GCC.yml

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  6. update doc artifact path

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  7. Only build gcovr report in one job

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  8. restore gcov cmake flags

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  9. rm developer.yml

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  10. Fix gcov cmake flags GCC.yml

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  11. Update test_fv3_io_def.F90

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  12. remove test_fv3_io_def.F90

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  13. Convert GFS_tbd and GFS_cldprop DDTs: use contiguous arrays instead o… 

    …f blocked data structures
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Commits on Jan 20, 2024

  1. Update .gitmodules and submodule pointer for GFDL_atmos_cubed_sphere … 

    …for code review and testing
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  2. Convert GFS_statein and GFS_stateout DDTs: use contiguous arrays inst… 

    …ead of blocked data structures
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Commits on Jan 21, 2024

  1. Implement setup_exportdata for chunked arrays and demonstrate for GFS… 

    …_statein and GFS_stateout
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Commits on Feb 15, 2024

  1. test re-removing PIO dep in ci CMake

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  2. Update CMakeLists.txt

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Commits on Feb 22, 2024

  1. Convert GFS_sfcprop DDT: use contiguous arrays instead of blocked dat… 

    …a structures
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Commits on Feb 23, 2024

  1. Convert GFS_radtend DDT: use contiguous arrays instead of blocked dat… 

    …a structures
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Commits on Feb 26, 2024

  1. Convert GFS_coupling DDT: use contiguous arrays instead of blocked da… 

    …ta structures
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Commits on Feb 27, 2024

  1. Update .gitmodules and submodule pointer for ccpp-physics for code re… 

    …view and testing
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  2. Convert GFS_intdiag DDT: use contiguous arrays instead of blocked dat… 

    …a structures; remove GFS_data DDT
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Commits on Feb 28, 2024

  1. TEST: comment out unused data types in moving_nest/fv_moving_nest.F90

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  2. Replace IPD_Data with GFS DDTs in moving_nest/fv_moving_nest_physics.F90

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  3. Update moving_nest/fv_moving_nest_main.F90: use GFS DDTs

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  4. Update moving nest calls in atmos_model.F90

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Commits on Mar 6, 2024

  1. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support_use_it
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  2. After update from develop, replace blocked GFS data types with contig… 

    …uous GFS DDTs
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Commits on Mar 7, 2024

  1. Update more old IPD DDTs to GFS DDTs in moving_nest/fv_moving_nest_ph… 

    …ysics.F90
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Commits on Mar 8, 2024

  1. Bug fix in ccpp/data/GFS_typedefs.meta: replace horizontal_loop_exten… 

    …t for recently added variables with horizontal_dimension
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Commits on Mar 11, 2024

  1. Revert .gitmodules entry and update submodule pointer for ccpp-framework

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  2. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support_use_it
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Commits on Apr 10, 2024

  1. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support_use_it
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  1. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support_use_it
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  2. Update .gitmodules and submodule pointer for ccpp-framework for code … 

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Commits on May 13, 2024

  1. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support_use_it
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  2. Merge branch 'develop' into add_unit_testing

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  3. GCC.yml: fix devbuild condition

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  4. GCC.yml: fix devbuild condition pt 2

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  5. rearrange GCC.yml

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  6. Update GCC.yml

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  7. fix gcovr

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  8. Update GCC.yml

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  9. Update GCC.yml

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  10. Update GCC.yml

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  11. Update GCC.yml

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  12. debug

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Commits on May 14, 2024

  1. Update GCC.yml

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  2. Update GCC.yml

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Commits on May 22, 2024

  1. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support_use_it
    @climbfuji
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  2. Bug fix in ccpp/data/GFS_typedefs.F90: revert 'allocatable' to 'pointer'

    @climbfuji
    climbfuji committed May 22, 2024
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  3. Update submodule pointer for ccpp-framework and revert entry in .gitm… 

    …odules
    @climbfuji
    climbfuji committed May 22, 2024
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  4. Address first round of reviewer comments

    @climbfuji
    climbfuji committed May 22, 2024
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Commits on Jun 3, 2024

  1. Update submodule pointer for ccpp-physics

    @climbfuji
    climbfuji committed Jun 3, 2024
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Commits on Jun 13, 2024

  1. Update submodule pointer for ccpp-physics

    @climbfuji
    climbfuji committed Jun 13, 2024
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Commits on Jun 24, 2024

  1. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support_use_it
    @climbfuji
    climbfuji committed Jun 24, 2024
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Commits on Jun 27, 2024

  1. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support_use_it
    @climbfuji
    climbfuji committed Jun 27, 2024
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  2. Merge branch 'add_unit_testing' of https://github.com/AlexanderRicher… 

    …t-NOAA/fv3atm into feature/chunked_array_support_use_it
    @climbfuji
    climbfuji committed Jun 27, 2024
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Commits on Jul 12, 2024

  1. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support_use_it
    @climbfuji
    climbfuji committed Jul 12, 2024
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Commits on Jul 18, 2024

  1. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into HEAD

    @climbfuji
    climbfuji committed Jul 18, 2024
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  2. Update submodule pointer for atmos_cubed_sphere

    @climbfuji
    climbfuji committed Jul 18, 2024
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Commits on Jul 23, 2024

  1. Move data copying outside of block loop

    @dustinswales
    dustinswales committed Jul 23, 2024
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  2. Merge pull request #13 from dustinswales/move_stmt 

    Move data copying outside of block loop
    @climbfuji
    climbfuji authored Jul 23, 2024
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Commits on Jul 24, 2024

  1. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support_use_it
    @climbfuji
    climbfuji committed Jul 24, 2024
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Commits on Aug 2, 2024

  1. Merge branch 'develop' of https://github.com/NOAA-EMC/fv3atm into fea… 

    …ture/chunked_array_support_use_it
    @climbfuji
    climbfuji committed Aug 2, 2024
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Commits on Aug 8, 2024

  1. update hashes and revert changes in gitmodules: acs and physics

    @jkbk2004
    jkbk2004 committed Aug 8, 2024
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