diff --git a/physics/cires_ugwp.F90 b/physics/cires_ugwp.F90
index 394a04c1e..b694b1420 100644
--- a/physics/cires_ugwp.F90
+++ b/physics/cires_ugwp.F90
@@ -187,7 +187,8 @@ end subroutine cires_ugwp_finalize
!! \section arg_table_cires_ugwp_run Argument Table
!! \htmlinclude cires_ugwp_run.html
!!
-!>\section gen_cires_ugwp_run General Algorithm
+!> \section gen_cires_ugwp CIRES UGWP Scheme General Algorithm
+!! @{
subroutine cires_ugwp_run(do_ugwp, me, master, im, levs, ntrac, dtp, kdt, lonr, &
oro, oro_uf, hprime, nmtvr, oc, theta, sigma, gamma, elvmax, clx, oa4, &
do_tofd, ldiag_ugwp, cdmbgwd, xlat, xlat_d, sinlat, coslat, area, &
@@ -410,5 +411,6 @@ subroutine cires_ugwp_run(do_ugwp, me, master, im, levs, ntrac, dtp, kdt, lonr
gw_dudt = gw_dudt*(1.-pked) + ed_dudt*pked
end subroutine cires_ugwp_run
+!! @}
!>@}
end module cires_ugwp
diff --git a/physics/docs/ufs_doxyfile b/physics/docs/ccppv4_doxyfile
similarity index 96%
rename from physics/docs/ufs_doxyfile
rename to physics/docs/ccppv4_doxyfile
index 84e05db94..e80b27eb9 100644
--- a/physics/docs/ufs_doxyfile
+++ b/physics/docs/ccppv4_doxyfile
@@ -103,12 +103,19 @@ WARN_LOGFILE =
INPUT = pdftxt/mainpage.txt \
pdftxt/all_shemes_list.txt \
pdftxt/GFSv15p2_suite.txt \
+ pdftxt/GFSv15p2_no_nsst_suite.txt \
+ pdftxt/suite_FV3_GFS_v15p2.xml.txt \
+ pdftxt/suite_FV3_GFS_v15p2_no_nsst.xml.txt \
pdftxt/GFSv16beta_suite.txt \
+ pdftxt/GFSv16beta_no_nsst_suite.txt \
+ pdftxt/suite_FV3_GFS_v16beta.xml.txt \
+ pdftxt/suite_FV3_GFS_v16beta_no_nsst.xml.txt \
pdftxt/GSD_adv_suite.txt \
pdftxt/CPT_adv_suite.txt \
pdftxt/GFS_RRTMG.txt \
pdftxt/GFS_SFCLYR.txt \
pdftxt/GFS_NSST.txt \
+ pdftxt/GFS_OCEAN.txt \
pdftxt/GFS_NOAH.txt \
pdftxt/GFS_SFCSICE.txt \
pdftxt/GFS_HEDMF.txt \
@@ -171,6 +178,7 @@ INPUT = pdftxt/mainpage.txt \
### Land Surface
../sfc_diff.f \
../sfc_nst.f \
+ ../sfc_ocean.F \
../module_nst_model.f90 \
../module_nst_parameters.f90 \
../module_nst_water_prop.f90 \
diff --git a/physics/docs/library.bib b/physics/docs/library.bib
index 7384e08a0..dd2b2042e 100644
--- a/physics/docs/library.bib
+++ b/physics/docs/library.bib
@@ -1,7 +1,7 @@
%% This BibTeX bibliography file was created using BibDesk.
-%% https://bibdesk.sourceforge.io/
+%% http://bibdesk.sourceforge.net/
-%% Created for Grant Firl at 2019-10-25 16:36:06 -0600
+%% Created for Man Zhang at 2020-03-02 13:10:25 -0700
%% Saved with string encoding Unicode (UTF-8)
@@ -1859,12 +1859,12 @@ @article{zeng_and_dickinson_1998
@conference{zheng_et_al_2009,
Address = {Omaha, Nebraska},
Author = {W. Zheng and H. Wei and J. Meng and M. Ek and K. Mitchell and J. Derber and X. Zeng and Z. Wang},
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Date-Added = {2018-01-26 22:19:06 +0000},
Date-Modified = {2018-01-29 23:51:37 +0000},
Organization = {The 23rd Conference on Weather Analysis and Forecasting (WAF)/19th Conference on Numerical Weather Prediction(NWP)},
Title = {Improvement of land surface skin temperature in NCEP Operational NWP models and its impact on satellite Data Assimilation},
- Year = {2009}}
+ Year = {2009},
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@article{chen_et_al_1997,
Author = {F. Chen and Z. Janjic and K. Mitchell},
@@ -2016,11 +2016,11 @@ @url{Li_2015
Url = {http://cpo.noaa.gov/sites/cpo/MAPP/workshops/rtf_technical_ws/presentations/21_Xu_Li.pdf},
Bdsk-Url-1 = {http://cpo.noaa.gov/sites/cpo/MAPP/workshops/rtf_technical_ws/presentations/21_Xu_Li.pdf}}
-@url{li_and_derber_2009,
+@webpage{li_and_derber_2009,
Author = {Xu Li and John Derber},
- Date-Modified = {2018-07-17 20:46:44 +0000},
+ Date-Modified = {2020-02-24 17:06:35 +0000},
Title = {Near Sea Surface Temperatures (NSST) Analysis in NCEP GFS},
- Url = {https://www.jcsda.noaa.gov/documents/meetings/wkshp2008/4/JCSDA_2008_Li.pdf},
+ Url = {http://data.jcsda.org/Workshops/6th-workshop-onDA/Session-4/JCSDA_2008_Li.pdf},
Bdsk-Url-1 = {https://www.jcsda.noaa.gov/documents/meetings/wkshp2008/4/JCSDA_2008_Li.pdf}}
@article{Fairall_et_al_1996,
@@ -2103,7 +2103,6 @@ @article{iacono_et_al_2008
@article{grant_2001,
Abstract = {A closure for the fluxes of mass, heat, and moisture at cloud base in the cumulus-capped boundary layer is developed. The cloud-base mass flux is obtained from a simplifed turbulence kinetic energy (TKE) budget for the sub-cloud layer, in which cumulus convection is assumed to be associated with a transport of TKE from the sub-cloud layer to the cloud layer.The heat and moisture fluxes are obtained from a jump model based on the virtual-potential-temperature equation. A key part of this parametrization is the parametrization of the virtual-temperature flux at the top of the transition zone between the sub-cloud and cloud layers.It is argued that pressure fluctuations must be responsible for the transport of TKE from the cloud layer to the sub-cloud layer.},
Author = {A. L. M. Grant},
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Date-Added = {2016-06-15 22:11:22 +0000},
Date-Modified = {2018-07-06 19:02:34 +0000},
Doi = {10.1002/qj.49712757209},
@@ -2117,13 +2116,13 @@ @article{grant_2001
Url = {http://dx.doi.org/10.1002/qj.49712757209},
Volume = {127},
Year = {2001},
+ Bdsk-File-1 = {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},
Bdsk-Url-1 = {http://dx.doi.org/10.1002/qj.49712757209}}
@article{zhang_and_wu_2003,
Abstract = {Abstract This study uses a 2D cloud-resolving model to investigate the vertical transport of horizontal momentum and to understand the role of a convection-generated perturbation pressure field in the momentum transport by convective systems during part of the Tropical Ocean and Global Atmosphere Coupled Ocean?Atmosphere Response Experiment (TOGA COARE) Intensive Observation Period. It shows that convective updrafts transport a significant amount of momentum vertically. This transport is downgradient in the easterly wind regime, but upgradient during a westerly wind burst. The differences in convective momentum transport between easterly and westerly wind regimes are examined. The perturbation pressure gradient accounts for an important part of the apparent momentum source. In general it is opposite in sign to the product of cloud mass flux and the vertical wind shear, with smaller magnitude. Examination of the dynamic forcing to the pressure field demonstrates that the linear forcing representing the interaction between the convective updrafts and the large-scale wind shear is the dominant term, while the nonlinear forcing is of secondary importance. Thus, parameterization schemes taking into account the linear interaction between the convective updrafts and the large-scale wind shear can capture the essential features of the perturbation pressure field. The parameterization scheme for momentum transport by Zhang and Cho is evaluated using the model simulation data. The parameterized pressure gradient force using the scheme is in excellent agreement with the simulated one. The parameterized apparent momentum source is also in good agreement with the model simulation. Other parameterization methods for the pressure gradient are also discussed.},
Annote = {doi: 10.1175/1520-0469(2003)060<1120:CMTAPP>2.0.CO;2},
Author = {Zhang, Guang J. and Wu, Xiaoqing},
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Booktitle = {Journal of the Atmospheric Sciences},
Da = {2003/05/01},
Date-Added = {2016-06-14 23:39:50 +0000},
@@ -2142,13 +2141,13 @@ @article{zhang_and_wu_2003
Url = {http://dx.doi.org/10.1175/1520-0469(2003)060<1120:CMTAPP>2.0.CO;2},
Volume = {60},
Year = {2003},
+ Bdsk-File-1 = {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},
Bdsk-Url-1 = {http://dx.doi.org/10.1175/1520-0469(2003)060%3C1120:CMTAPP%3E2.0.CO;2}}
@article{fritsch_and_chappell_1980,
Abstract = {Abstract A parameterization formulation for incorporating the effects of midlatitude deep convection into mesoscale-numerical models is presented. The formulation is based on the hypothesis that the buoyant energy available to a parcel, in combination with a prescribed period of time for the convection to remove that energy, can be used to regulate the amount of convection in a mesoscale numerical model grid element. Individual clouds are represented as entraining moist updraft and downdraft plumes. The fraction of updraft condensate evaporated in moist downdrafts is determined from an empirical relationship between the vertical shear of the horizontal wind and precipitation efficiency. Vertical transports of horizontal momentum and warming by compensating subsidence are included in the parameterization. Since updraft and downdraft areas are sometimes a substantial fraction of mesoscale model grid-element areas, grid-point temperatures (adjusted for convection) are an area-weighted mean of updraft, downdraft and environmental temperatures.},
Annote = {doi: 10.1175/1520-0469(1980)037<1722:NPOCDM>2.0.CO;2},
Author = {Fritsch, J. M. and Chappell, C. F.},
- Bdsk-File-1 = {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},
Booktitle = {Journal of the Atmospheric Sciences},
Da = {1980/08/01},
Date = {1980/08/01},
@@ -2169,12 +2168,12 @@ @article{fritsch_and_chappell_1980
Volume = {37},
Year = {1980},
Year1 = {1980},
+ Bdsk-File-1 = {YnBsaXN0MDDSAQIDBFxyZWxhdGl2ZVBhdGhZYWxpYXNEYXRhXxBDLi4vLi4vQ2xvdWRTdGF0aW9uL2ZpcmxfbGlicmFyeS9maXJsX2xpYnJhcnlfZmlsZXMvRnJpdHNjaC8xOTgwLnBkZk8RAcoAAAAAAcoAAgAADE1hY2ludG9zaCBIRAAAAAAAAAAAAAAAAAAAANHnJFJIKwAAARCuMwgxOTgwLnBkZgAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABEKs103xvpgAAAAAAAAAAAAIABQAACSAAAAAAAAAAAAAAAAAAAAAHRnJpdHNjaAAAEAAIAADR53iyAAAAEQAIAADTfMQGAAAAAQAYARCuMwAobJYAKGyLAChnewAbXgcAAphcAAIAXU1hY2ludG9zaCBIRDpVc2VyczoAZ3JhbnRmOgBDbG91ZFN0YXRpb246AGZpcmxfbGlicmFyeToAZmlybF9saWJyYXJ5X2ZpbGVzOgBGcml0c2NoOgAxOTgwLnBkZgAADgASAAgAMQA5ADgAMAAuAHAAZABmAA8AGgAMAE0AYQBjAGkAbgB0AG8AcwBoACAASABEABIASlVzZXJzL2dyYW50Zi9DbG91ZFN0YXRpb24vZmlybF9saWJyYXJ5L2ZpcmxfbGlicmFyeV9maWxlcy9Gcml0c2NoLzE5ODAucGRmABMAAS8AABUAAgAN//8AAAAIAA0AGgAkAGoAAAAAAAACAQAAAAAAAAAFAAAAAAAAAAAAAAAAAAACOA==},
Bdsk-Url-1 = {http://dx.doi.org/10.1175/1520-0469(1980)037%3C1722:NPOCDM%3E2.0.CO;2}}
@article{bechtold_et_al_2008,
Abstract = {Advances in simulating atmospheric variability with the ECMWF model are presented that stem from revisions of the convection and diffusion parametrizations. The revisions concern in particular the introduction of a variable convective adjustment time-scale, a convective entrainment rate proportional to the environmental relative humidity, as well as free tropospheric diffusion coefficients for heat and momentum based on Monin--Obukhov functional dependencies.The forecasting system is evaluated against analyses and observations using high-resolution medium-range deterministic and ensemble forecasts, monthly and seasonal integrations, and decadal integrations with coupled atmosphere-ocean models. The results show a significantly higher and more realistic level of model activity in terms of the amplitude of tropical and extratropical mesoscale, synoptic and planetary perturbations. Importantly, with the higher variability and reduced bias not only the probabilistic scores are improved, but also the midlatitude deterministic scores in the short and medium ranges. Furthermore, for the first time the model is able to represent a realistic spectrum of convectively coupled equatorial Kelvin and Rossby waves, and maintains a realistic amplitude of the Madden--Julian oscillation (MJO) during monthly forecasts. However, the propagation speed of the MJO is slower than observed. The higher tropical tropospheric wave activity also results in better stratospheric temperatures and winds through the deposition of momentum.The partitioning between convective and resolved precipitation is unaffected by the model changes with roughly 62% of the total global precipitation being of the convective type. Finally, the changes in convection and diffusion parametrizations resulted in a larger spread of the ensemble forecasts, which allowed the amplitude of the initial perturbations in the ensemble prediction system to decrease by 30%. Copyright {\copyright} 2008 Royal Meteorological Society},
Author = {Bechtold, Peter and K{\"o}hler, Martin and Jung, Thomas and Doblas-Reyes, Francisco and Leutbecher, Martin and Rodwell, Mark J. and Vitart, Frederic and Balsamo, Gianpaolo},
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Date-Added = {2016-06-14 23:11:58 +0000},
Date-Modified = {2016-06-14 23:11:58 +0000},
Doi = {10.1002/qj.289},
@@ -2188,12 +2187,12 @@ @article{bechtold_et_al_2008
Url = {http://dx.doi.org/10.1002/qj.289},
Volume = {134},
Year = {2008},
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Bdsk-Url-1 = {http://dx.doi.org/10.1002/qj.289}}
@article{han_and_pan_2011,
Annote = {doi: 10.1175/WAF-D-10-05038.1},
Author = {Han, Jongil and Pan, Hua-Lu},
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Booktitle = {Weather and Forecasting},
Da = {2011/08/01},
Date = {2011/08/01},
@@ -2214,22 +2213,22 @@ @article{han_and_pan_2011
Volume = {26},
Year = {2011},
Year1 = {2011},
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Bdsk-Url-1 = {http://dx.doi.org/10.1175/WAF-D-10-05038.1}}
@article{pan_and_wu_1995,
Author = {Pan, H. -L. and W.-S. Wu},
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Date-Added = {2016-06-14 23:06:41 +0000},
Date-Modified = {2016-06-14 23:06:41 +0000},
Journal = {NMC Office Note, No. 409},
Pages = {40pp},
Title = {Implementing a Mass Flux Convection Parameterization Package for the NMC Medium-Range Forecast Model},
- Year = {1995}}
+ Year = {1995},
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@article{grell_1993,
Annote = {doi: 10.1175/1520-0493(1993)121<0764:PEOAUB>2.0.CO;2},
Author = {Grell, Georg A.},
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Booktitle = {Monthly Weather Review},
Da = {1993/03/01},
Date = {1993/03/01},
@@ -2250,11 +2249,11 @@ @article{grell_1993
Volume = {121},
Year = {1993},
Year1 = {1993},
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Bdsk-Url-1 = {http://dx.doi.org/10.1175/1520-0493(1993)121%3C0764:PEOAUB%3E2.0.CO;2}}
@article{arakawa_and_schubert_1974,
Author = {Arakawa, A and Schubert, WH},
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Date-Added = {2016-06-14 23:04:30 +0000},
Date-Modified = {2018-07-18 19:00:17 +0000},
Isi = {A1974S778800004},
@@ -2267,6 +2266,7 @@ @article{arakawa_and_schubert_1974
Title = {Interaction of a cumulus cloud ensemble with the large-scale environment, Part I},
Volume = {31},
Year = {1974},
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Bdsk-Url-1 = {http://ws.isiknowledge.com/cps/openurl/service?url_ver=Z39.88-2004&rft_id=info:ut/A1974S778800004}}
@article{harshvardhan_et_al_1989,
@@ -2500,7 +2500,6 @@ @article{akmaev_1991
@article{siebesma_et_al_2007,
Abstract = {A better conceptual understanding and more realistic parameterizations of convective boundary layers in climate and weather prediction models have been major challenges in meteorological research. In particular, parameterizations of the dry convective boundary layer, in spite of the absence of water phase-changes and its consequent simplicity as compared to moist convection, typically suffer from problems in attempting to represent realistically the boundary layer growth and what is often referred to as countergradient fluxes. The eddy-diffusivity (ED) approach has been relatively successful in representing some characteristics of neutral boundary layers and surface layers in general. The mass-flux (MF) approach, on the other hand, has been used for the parameterization of shallow and deep moist convection. In this paper, a new approach that relies on a combination of the ED and MF parameterizations (EDMF) is proposed for the dry convective boundary layer. It is shown that the EDMF approach follows naturally from a decomposition of the turbulent fluxes into 1) a part that includes strong organized updrafts, and 2) a remaining turbulent field. At the basis of the EDMF approach is the concept that nonlocal subgrid transport due to the strong updrafts is taken into account by the MF approach, while the remaining transport is taken into account by an ED closure. Large-eddy simulation (LES) results of the dry convective boundary layer are used to support the theoretical framework of this new approach and to determine the parameters of the EDMF model. The performance of the new formulation is evaluated against LES results, and it is shown that the EDMF closure is able to reproduce the main properties of dry convective boundary layers in a realistic manner. Furthermore, it will be shown that this approach has strong advantages over the more traditional countergradient approach, especially in the entrainment layer. As a result, this EDMF approach opens the way to parameterize the clear and cumulus-topped boundary layer in a simple and unified way.},
Author = {Siebesma, A. Pier and Soares, Pedro M. M. and Teixeira, Joao},
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Date-Added = {2016-05-20 17:17:49 +0000},
Date-Modified = {2016-05-20 17:17:49 +0000},
Doi = {DOI 10.1175/JAS3888.1},
@@ -2514,12 +2513,12 @@ @article{siebesma_et_al_2007
Title = {A combined eddy-diffusivity mass-flux approach for the convective boundary layer},
Volume = {64},
Year = {2007},
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Bdsk-Url-1 = {http://ws.isiknowledge.com/cps/openurl/service?url_ver=Z39.88-2004&rft_id=info:ut/000245742600011}}
@article{soares_et_al_2004,
Abstract = {Recently, a new consistent way of parametrizing simultaneously local and non-local turbulent transport for the convective atmospheric boundary layer has been proposed and tested for the clear boundary layer. This approach assumes that in the convective boundary layer the subgrid-scale fluxes result from two different mixing scales: small eddies, that are parametrized by an eddy-diffusivity approach, and thermals, which are represented by a mass-flux contribution. Since the interaction between the cloud layer and the underlying sub-cloud layer predominantly takes place through strong updraughts, this approach offers an interesting avenue of establishing a unified description of the turbulent transport in the cumulus-topped boundary layer. This paper explores the possibility of such a new approach for the cumulus-topped boundary layer. In the sub-cloud and cloud layers, the mass-flux term represents the effect of strong updraughts. These are modelled by a simple entraining parcel, which determines the mean properties of the strong updraughts, the boundary-layer height, the lifting condensation level and cloud top. The residual smaller-scale turbulent transport is parametrized with an eddy-diffusivity approach that uses a turbulent kinetic energy closure. The new scheme is implemented and tested in the research model MesoNH. Copyright {\copyright} 2004 Royal Meteorological Society},
Author = {Soares, P. M. M. and Miranda, P. M. A. and Siebesma, A. P. and Teixeira, J.},
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Date-Added = {2016-05-20 17:17:49 +0000},
Date-Modified = {2016-05-20 17:17:49 +0000},
Doi = {10.1256/qj.03.223},
@@ -2533,11 +2532,11 @@ @article{soares_et_al_2004
Url = {http://dx.doi.org/10.1256/qj.03.223},
Volume = {130},
Year = {2004},
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Bdsk-Url-1 = {http://dx.doi.org/10.1256/qj.03.223}}
@article{troen_and_mahrt_1986,
Author = {Troen, IB and Mahrt, L.},
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Date-Added = {2016-05-20 17:17:49 +0000},
Date-Modified = {2016-05-20 17:17:49 +0000},
Doi = {10.1007/BF00122760},
@@ -2551,13 +2550,13 @@ @article{troen_and_mahrt_1986
Url = {http://dx.doi.org/10.1007/BF00122760},
Volume = {37},
Year = {1986},
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Bdsk-Url-1 = {http://dx.doi.org/10.1007/BF00122760}}
@article{macvean_and_mason_1990,
Abstract = {Abstract In a recent paper, Kuo and Schubert demonstrated the lack of observational support for the relevance of the criterion for cloud-top entrainment instability proposed by Randall and by Deardorff. Here we derive a new criterion, based on a model of the instability as resulting from the energy released close to cloud top, by Mixing between saturated boundary-layer air and unsaturated air from above the capping inversion. The condition is derived by considering the net conversion from potential to kinetic energy in a system consisting of two layers of fluid straddling cloud-top, when a small amount of mixing occurs between these layers. This contrasts with previous analyses, which only considered the change in buoyancy of the cloud layer when unsaturated air is mixed into it. In its most general form, this new criterion depends on the ratio of the depths of the layers involved in the mixing. It is argued that, for a self-sustaining instability, there must be a net release of kinetic energy on the same depth and time scales as the entrainment process itself. There are two plausible ways in which this requirement may be satisfied. Either one takes the depths of the layers involved in the mixing to each be comparable to the vertical scale of the entrainment process, which is typically of order tens of meters or less, or alternatively, one must allow for the efficiency with which energy released by mixing through a much deeper lower layer becomes available to initiate further entrainment. In both cases the same criterion for instability results. This criterion is much more restrictive than that proposed by Randall and by Deardorff; furthermore, the observational data is then consistent with the predictions of the current theory. Further analysis provides estimates of the turbulent fluxes associated with cloud-top entrainment instability. This analysis effectively constitutes an energetically consistent turbulence closure for models of boundary layers with cloud. The implications for such numerical models are discussed. Comparisons are also made with other possible criteria for cloud-top entrainment instability which have recently been suggested.},
Annote = {doi: 10.1175/1520-0469(1990)047<1012:CTEITS>2.0.CO;2},
Author = {MacVean, M. K. and Mason, P. J.},
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Booktitle = {Journal of the Atmospheric Sciences},
Da = {1990/04/01},
Date-Added = {2016-05-20 17:16:05 +0000},
@@ -2576,11 +2575,11 @@ @article{macvean_and_mason_1990
Url = {http://dx.doi.org/10.1175/1520-0469(1990)047<1012:CTEITS>2.0.CO;2},
Volume = {47},
Year = {1990},
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Bdsk-Url-1 = {http://dx.doi.org/10.1175/1520-0469(1990)047%3C1012:CTEITS%3E2.0.CO;2}}
@article{louis_1979,
Author = {Louis, JF},
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Date-Added = {2016-05-20 17:15:52 +0000},
Date-Modified = {2016-05-20 17:15:52 +0000},
Isi = {A1979HT69700004},
@@ -2593,12 +2592,12 @@ @article{louis_1979
Title = {A PARAMETRIC MODEL OF VERTICAL EDDY FLUXES IN THE ATMOSPHERE},
Volume = {17},
Year = {1979},
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Bdsk-Url-1 = {http://ws.isiknowledge.com/cps/openurl/service?url_ver=Z39.88-2004&rft_id=info:ut/A1979HT69700004}}
@article{lock_et_al_2000,
Abstract = {A new boundary layer turbulent mixing scheme has been developed for use in the UKMO weather forecasting and climate prediction models. This includes a representation of nonlocal mixing (driven by both surface fluxes and cloud-top processes) in unstable layers, either coupled to or decoupled from the surface, and an explicit entrainment parameterization. The scheme is formulated in moist conserved variables so that it can treat both dry and cloudy layers. Details of the scheme and examples of its performance in single-column model tests are presented.},
Author = {Lock, AP and Brown, AR and Bush, MR and Martin, GM and Smith, RNB},
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Date-Added = {2016-05-20 17:15:36 +0000},
Date-Modified = {2016-05-20 17:15:36 +0000},
Isi = {000089461100008},
@@ -2611,13 +2610,13 @@ @article{lock_et_al_2000
Title = {A new boundary layer mixing scheme. {P}art {I}: Scheme description and single-column model tests},
Volume = {128},
Year = {2000},
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Bdsk-Url-1 = {http://ws.isiknowledge.com/cps/openurl/service?url_ver=Z39.88-2004&rft_id=info:ut/000089461100008}}
@article{hong_and_pan_1996,
Abstract = {Abstract In this paper, the incorporation of a simple atmospheric boundary layer diffusion scheme into the NCEP Medium-Range Forecast Model is described. A boundary layer diffusion package based on the Troen and Mahrt nonlocal diffusion concept has been tested for possible operational implementation. The results from this approach are compared with those from the local diffusion approach, which is the current operational scheme, and verified against FIFE observations during 9?10 August 1987. The comparisons between local and nonlocal approaches are extended to the forecast for a heavy rain case of 15?17 May 1995. The sensitivity of both the boundary layer development and the precipitation forecast to the tuning parameters in the nonlocal diffusion scheme is also investigated. Special attention is given to the interaction of boundary layer processes with precipitation physics. Some results of parallel runs during August 1995 are also presented.},
Annote = {doi: 10.1175/1520-0493(1996)124<2322:NBLVDI>2.0.CO;2},
Author = {Hong, Song-You and Pan, Hua-Lu},
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Booktitle = {Monthly Weather Review},
Da = {1996/10/01},
Date = {1996/10/01},
@@ -2638,13 +2637,13 @@ @article{hong_and_pan_1996
Volume = {124},
Year = {1996},
Year1 = {1996},
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Bdsk-Url-1 = {http://dx.doi.org/10.1175/1520-0493(1996)124%3C2322:NBLVDI%3E2.0.CO;2}}
@article{han_and_pan_2006,
Abstract = {Abstract A parameterization of the convection-induced pressure gradient force (PGF) in convective momentum transport (CMT) is tested for hurricane intensity forecasting using NCEP's operational Global Forecast System (GFS) and its nested Regional Spectral Model (RSM). In the parameterization the PGF is assumed to be proportional to the product of the cloud mass flux and vertical wind shear. Compared to control forecasts using the present operational GFS and RSM where the PGF effect in CMT is taken into account empirically, the new PGF parameterization helps increase hurricane intensity by reducing the vertical momentum exchange, giving rise to a closer comparison to the observations. In addition, the new PGF parameterization forecasts not only show more realistically organized precipitation patterns with enhanced hurricane intensity but also reduce the forecast track error. Nevertheless, the model forecasts with the new PGF parameterization still largely underpredict the observed intensity. One of the many possible reasons for the large underprediction may be the absence of hurricane initialization in the models.},
Annote = {doi: 10.1175/MWR3090.1},
Author = {Han, Jongil and Pan, Hua-Lu},
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Booktitle = {Monthly Weather Review},
Da = {2006/02/01},
Date-Added = {2016-05-20 17:11:17 +0000},
@@ -2663,11 +2662,11 @@ @article{han_and_pan_2006
Url = {http://dx.doi.org/10.1175/MWR3090.1},
Volume = {134},
Year = {2006},
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Bdsk-Url-1 = {http://dx.doi.org/10.1175/MWR3090.1}}
@article{businger_et_al_1971,
Author = {Businger, JA and Wyngaard, JC and Izumi, Y and Bradley, EF},
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Date-Added = {2016-05-20 17:10:50 +0000},
Date-Modified = {2018-07-18 18:58:08 +0000},
Isi = {A1971I822800004},
@@ -2680,6 +2679,7 @@ @article{businger_et_al_1971
Title = {Flux-profile relationships in the atmospheric surface layer},
Volume = {28},
Year = {1971},
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Bdsk-Url-1 = {http://ws.isiknowledge.com/cps/openurl/service?url_ver=Z39.88-2004&rft_id=info:ut/A1971I822800004}}
@article{xu_and_randall_1996,
@@ -2870,18 +2870,17 @@ @article{kim_and_arakawa_1995
@techreport{hou_et_al_2002,
Author = {Y. Hou and S. Moorthi and K. Campana},
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Date-Added = {2016-05-19 19:52:22 +0000},
Date-Modified = {2016-05-20 15:14:59 +0000},
Institution = {NCEP},
Number = {441},
Title = {Parameterization of Solar Radiation Transfer},
Type = {office note},
- Year = {2002}}
+ Year = {2002},
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@article{hu_and_stamnes_1993,
Author = {Y.X. Hu and K. Stamnes},
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Date-Added = {2016-05-19 19:31:56 +0000},
Date-Modified = {2016-05-20 15:13:12 +0000},
Journal = {J. Climate},
@@ -2889,276 +2888,312 @@ @article{hu_and_stamnes_1993
Pages = {728-742},
Title = {An accurate parameterization of the radiative properties of water clouds suitable for use in climate models},
Volume = {6},
- Year = {1993}}
+ Year = {1993},
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@article{alexander_et_al_2010,
- author = {Alexander, M. J. and Geller, M. and McLandress, C. and Polavarapu, S. and Preusse, P. and Sassi, F. and Sato, K. and Eckermann, S. and Ern, M. and Hertzog, A. and Kawatani, Y. and Pulido, M. and Shaw, T. A. and Sigmond, M. and Vincent, R. and Watanabe, S.},
- title = {Recent developments in gravity-wave effects in climate models and the global distribution of gravity-wave momentum flux from observations and models},
- journal = {Quarterly Journal of the Royal Meteorological Society},
- volume = {136},
- number = {650},
- pages = {1103-1124},
- keywords = {atmosphere, gravity wave, momentum flux, drag, force, wind tendency, climate, global model},
- doi = {10.1002/qj.637},
- url = {https://rmets.onlinelibrary.wiley.com/doi/abs/10.1002/qj.637},
- eprint = {https://rmets.onlinelibrary.wiley.com/doi/pdf/10.1002/qj.637},
- year = {2010}}
+ Author = {Alexander, M. J. and Geller, M. and McLandress, C. and Polavarapu, S. and Preusse, P. and Sassi, F. and Sato, K. and Eckermann, S. and Ern, M. and Hertzog, A. and Kawatani, Y. and Pulido, M. and Shaw, T. A. and Sigmond, M. and Vincent, R. and Watanabe, S.},
+ Doi = {10.1002/qj.637},
+ Eprint = {https://rmets.onlinelibrary.wiley.com/doi/pdf/10.1002/qj.637},
+ Journal = {Quarterly Journal of the Royal Meteorological Society},
+ Keywords = {atmosphere, gravity wave, momentum flux, drag, force, wind tendency, climate, global model},
+ Number = {650},
+ Pages = {1103-1124},
+ Title = {Recent developments in gravity-wave effects in climate models and the global distribution of gravity-wave momentum flux from observations and models},
+ Url = {https://rmets.onlinelibrary.wiley.com/doi/abs/10.1002/qj.637},
+ Volume = {136},
+ Year = {2010},
+ Bdsk-Url-1 = {https://rmets.onlinelibrary.wiley.com/doi/abs/10.1002/qj.637},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1002/qj.637}}
@article{plougonven_and_zhang_2014,
- author = {Plougonven, R. and Zhang, F.},
- title = {Internal gravity waves from atmospheric jets and fronts},
- journal = {Reviews of Geophysics},
- volume = {52},
- number = {1},
- pages = {33-76},
- keywords = {gravity waves, stratosphere, atmosphere, jets, fronts, weather},
- doi = {10.1002/2012RG000419},
- url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2012RG000419},
- eprint = {https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1002/2012RG000419},
- year = {2014}}
+ Author = {Plougonven, R. and Zhang, F.},
+ Doi = {10.1002/2012RG000419},
+ Eprint = {https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1002/2012RG000419},
+ Journal = {Reviews of Geophysics},
+ Keywords = {gravity waves, stratosphere, atmosphere, jets, fronts, weather},
+ Number = {1},
+ Pages = {33-76},
+ Title = {Internal gravity waves from atmospheric jets and fronts},
+ Url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2012RG000419},
+ Volume = {52},
+ Year = {2014},
+ Bdsk-Url-1 = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2012RG000419},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1002/2012RG000419}}
@article{weinstock_1984,
- author = {Weinstock, J.},
- title = {Simplified derivation of an algorithm for nonlinear gravity waves},
- journal = {Journal of Geophysical Research: Space Physics},
- volume = {89},
- number = {A1},
- pages = {345-350},
- doi = {10.1029/JA089iA01p00345},
- url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/JA089iA01p00345},
- eprint = {https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1029/JA089iA01p00345},
- year = {1984}}
+ Author = {Weinstock, J.},
+ Doi = {10.1029/JA089iA01p00345},
+ Eprint = {https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1029/JA089iA01p00345},
+ Journal = {Journal of Geophysical Research: Space Physics},
+ Number = {A1},
+ Pages = {345-350},
+ Title = {Simplified derivation of an algorithm for nonlinear gravity waves},
+ Url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/JA089iA01p00345},
+ Volume = {89},
+ Year = {1984},
+ Bdsk-Url-1 = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/JA089iA01p00345},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1029/JA089iA01p00345}}
@article{holton_1983,
- author = {Holton, James R.},
- title = {The Influence of Gravity Wave Breaking on the General Circulation of the Middle Atmosphere},
- journal = {Journal of the Atmospheric Sciences},
- volume = {40},
- number = {10},
- pages = {2497-2507},
- year = {1983},
- doi = {10.1175/1520-0469(1983)040<2497:TIOGWB>2.0.CO;2},
- URL = {https://doi.org/10.1175/1520-0469(1983)040<2497:TIOGWB>2.0.CO;2},
- eprint = {https://doi.org/10.1175/1520-0469(1983)040<2497:TIOGWB>2.0.CO;2}}
+ Author = {Holton, James R.},
+ Doi = {10.1175/1520-0469(1983)040<2497:TIOGWB>2.0.CO;2},
+ Eprint = {https://doi.org/10.1175/1520-0469(1983)040<2497:TIOGWB>2.0.CO;2},
+ Journal = {Journal of the Atmospheric Sciences},
+ Number = {10},
+ Pages = {2497-2507},
+ Title = {The Influence of Gravity Wave Breaking on the General Circulation of the Middle Atmosphere},
+ Url = {https://doi.org/10.1175/1520-0469(1983)040<2497:TIOGWB>2.0.CO;2},
+ Volume = {40},
+ Year = {1983},
+ Bdsk-Url-1 = {https://doi.org/10.1175/1520-0469(1983)040%3C2497:TIOGWB%3E2.0.CO;2},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1175/1520-0469(1983)040%3C2497:TIOGWB%3E2.0.CO;2}}
@article{geller_et_al_2013,
- author = {Geller, M. A. and Alexander, M. Joan and Love, P. T. and Bacmeister, J. and Ern, M. and Hertzog, A. and Manzini, E. and Preusse, P. and Sato, K. and Scaife, A. A. and Zhou, T.},
- title = {A Comparison between Gravity Wave Momentum Fluxes in Observations and Climate Models},
- journal = {Journal of Climate},
- volume = {26},
- number = {17},
- pages = {6383-6405},
- year = {2013},
- doi = {10.1175/JCLI-D-12-00545.1},
- URL = {https://doi.org/10.1175/JCLI-D-12-00545.1},
- eprint = {https://doi.org/10.1175/JCLI-D-12-00545.1}}
+ Author = {Geller, M. A. and Alexander, M. Joan and Love, P. T. and Bacmeister, J. and Ern, M. and Hertzog, A. and Manzini, E. and Preusse, P. and Sato, K. and Scaife, A. A. and Zhou, T.},
+ Doi = {10.1175/JCLI-D-12-00545.1},
+ Eprint = {https://doi.org/10.1175/JCLI-D-12-00545.1},
+ Journal = {Journal of Climate},
+ Number = {17},
+ Pages = {6383-6405},
+ Title = {A Comparison between Gravity Wave Momentum Fluxes in Observations and Climate Models},
+ Url = {https://doi.org/10.1175/JCLI-D-12-00545.1},
+ Volume = {26},
+ Year = {2013},
+ Bdsk-Url-1 = {https://doi.org/10.1175/JCLI-D-12-00545.1},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1175/JCLI-D-12-00545.1}}
@article{garcia_et_al_2017,
- author = {Garcia, R. R. and Smith, A. K. and Kinnison, D. E. and Cámara, Á. and Murphy, D. J.},
- title = {Modification of the Gravity Wave Parameterization in the Whole Atmosphere Community Climate Model: Motivation and Results},
- journal = {Journal of the Atmospheric Sciences},
- volume = {74},
- number = {1},
- pages = {275-291},
- year = {2017},
- doi = {10.1175/JAS-D-16-0104.1},
- URL = {https://doi.org/10.1175/JAS-D-16-0104.1},
- eprint = {https://doi.org/10.1175/JAS-D-16-0104.1}}
+ Author = {Garcia, R. R. and Smith, A. K. and Kinnison, D. E. and C{\'a}mara, {\'A}. and Murphy, D. J.},
+ Doi = {10.1175/JAS-D-16-0104.1},
+ Eprint = {https://doi.org/10.1175/JAS-D-16-0104.1},
+ Journal = {Journal of the Atmospheric Sciences},
+ Number = {1},
+ Pages = {275-291},
+ Title = {Modification of the Gravity Wave Parameterization in the Whole Atmosphere Community Climate Model: Motivation and Results},
+ Url = {https://doi.org/10.1175/JAS-D-16-0104.1},
+ Volume = {74},
+ Year = {2017},
+ Bdsk-Url-1 = {https://doi.org/10.1175/JAS-D-16-0104.1},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1175/JAS-D-16-0104.1}}
@inproceedings{yudin_et_al_2016,
- title={Gravity wave physics in the NOAA Environmental Modeling System},
- author={Yudin, V.A. and Akmaev, R.A. and Fuller-Rowell, T.J. and Alpert, J.C.},
- booktitle={International SPARC Gravity Wave Symposium},
- volume={48},
- number={1},
- pages={012024},
- year={2016},
- organization={}}
+ Author = {Yudin, V.A. and Akmaev, R.A. and Fuller-Rowell, T.J. and Alpert, J.C.},
+ Booktitle = {International SPARC Gravity Wave Symposium},
+ Number = {1},
+ Pages = {012024},
+ Title = {Gravity wave physics in the NOAA Environmental Modeling System},
+ Volume = {48},
+ Year = {2016}}
@inproceedings{alpert_et_al_2018,
- title={Integrating Unified Gravity Wave Physics Research into the Next Generation Global Prediction System for NCEP Research to Operations},
- author={Alpert, Jordan C and Yudin, Valery and Fuller-Rowell, Tim and Akmaev, Rashid A},
- booktitle={98th American Meteorological Society Annual Meeting},
- year={2018},
- organization={AMS}}
+ Author = {Alpert, Jordan C and Yudin, Valery and Fuller-Rowell, Tim and Akmaev, Rashid A},
+ Booktitle = {98th American Meteorological Society Annual Meeting},
+ Organization = {AMS},
+ Title = {Integrating Unified Gravity Wave Physics Research into the Next Generation Global Prediction System for NCEP Research to Operations},
+ Year = {2018}}
@article{eckermann_2011,
- author = {Eckermann, Stephen D.},
- title = {Explicitly Stochastic Parameterization of Nonorographic Gravity Wave Drag},
- journal = {Journal of the Atmospheric Sciences},
- volume = {68},
- number = {8},
- pages = {1749-1765},
- year = {2011},
- doi = {10.1175/2011JAS3684.1},
- URL = {https://doi.org/10.1175/2011JAS3684.1},
- eprint = {https://doi.org/10.1175/2011JAS3684.1}}
+ Author = {Eckermann, Stephen D.},
+ Doi = {10.1175/2011JAS3684.1},
+ Eprint = {https://doi.org/10.1175/2011JAS3684.1},
+ Journal = {Journal of the Atmospheric Sciences},
+ Number = {8},
+ Pages = {1749-1765},
+ Title = {Explicitly Stochastic Parameterization of Nonorographic Gravity Wave Drag},
+ Url = {https://doi.org/10.1175/2011JAS3684.1},
+ Volume = {68},
+ Year = {2011},
+ Bdsk-Url-1 = {https://doi.org/10.1175/2011JAS3684.1},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1175/2011JAS3684.1}}
@article{lott_et_al_2012,
- author = {Lott, F. and Guez, L. and Maury, P.},
- title = {A stochastic parameterization of non-orographic gravity waves: Formalism and impact on the equatorial stratosphere},
- journal = {Geophysical Research Letters},
- volume = {39},
- number = {6},
- pages = {},
- keywords = {Quasi-Biennial Oscillation, Rossby-gravity waves, gravity waves, stochastic parameterization, stratospheric dynamics},
- doi = {10.1029/2012GL051001},
- url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2012GL051001},
- eprint = {https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1029/2012GL051001},
- year = {2012}}
+ Author = {Lott, F. and Guez, L. and Maury, P.},
+ Doi = {10.1029/2012GL051001},
+ Eprint = {https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1029/2012GL051001},
+ Journal = {Geophysical Research Letters},
+ Keywords = {Quasi-Biennial Oscillation, Rossby-gravity waves, gravity waves, stochastic parameterization, stratospheric dynamics},
+ Number = {6},
+ Title = {A stochastic parameterization of non-orographic gravity waves: Formalism and impact on the equatorial stratosphere},
+ Url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2012GL051001},
+ Volume = {39},
+ Year = {2012},
+ Bdsk-Url-1 = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2012GL051001},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1029/2012GL051001}}
@conference{yudin_et_al_2018,
- author = {Yudin, V. A and Akmaev, R. A. and Alpert, J. C. and Fuller-Rowell T. J., and Karol S. I.},
- Booktitle = {25th Conference on Numerical Weather Prediction},
- Date-Added = {2018-06-04 10:50:44 -0600},
- Date-Modified = {2018-06-04 10:54:39 -0600},
- Editor = {Am. Meteorol. Soc.},
- Title = {Gravity Wave Physics and Dynamics in the FV3-based Atmosphere Models Extended into the Mesosphere},
- Year = {2018}}
+ Author = {Yudin, V. A and Akmaev, R. A. and Alpert, J. C. and Fuller-Rowell T. J., and Karol S. I.},
+ Booktitle = {25th Conference on Numerical Weather Prediction},
+ Date-Added = {2018-06-04 10:50:44 -0600},
+ Date-Modified = {2018-06-04 10:54:39 -0600},
+ Editor = {Am. Meteorol. Soc.},
+ Title = {Gravity Wave Physics and Dynamics in the FV3-based Atmosphere Models Extended into the Mesosphere},
+ Year = {2018}}
@article{hines_1997,
- title = "Doppler-spread parameterization of gravity-wave momentum deposition in the middle atmosphere. Part 2: Broad and quasi monochromatic spectra, and implementation",
- journal = "Journal of Atmospheric and Solar-Terrestrial Physics",
- volume = "59",
- number = "4",
- pages = "387 - 400",
- year = "1997",
- issn = "1364-6826",
- doi = "https://doi.org/10.1016/S1364-6826(96)00080-6",
- url = "http://www.sciencedirect.com/science/article/pii/S1364682696000806",
- author = "Colin O. Hines"}
+ Author = {Colin O. Hines},
+ Doi = {https://doi.org/10.1016/S1364-6826(96)00080-6},
+ Issn = {1364-6826},
+ Journal = {Journal of Atmospheric and Solar-Terrestrial Physics},
+ Number = {4},
+ Pages = {387 - 400},
+ Title = {Doppler-spread parameterization of gravity-wave momentum deposition in the middle atmosphere. Part 2: Broad and quasi monochromatic spectra, and implementation},
+ Url = {http://www.sciencedirect.com/science/article/pii/S1364682696000806},
+ Volume = {59},
+ Year = {1997},
+ Bdsk-Url-1 = {http://www.sciencedirect.com/science/article/pii/S1364682696000806},
+ Bdsk-Url-2 = {https://doi.org/10.1016/S1364-6826(96)00080-6}}
@article{alexander_and_dunkerton_1999,
- author = {Alexander, M. J. and Dunkerton, T. J.},
- title = {A Spectral Parameterization of Mean-Flow Forcing due to Breaking Gravity Waves},
- journal = {Journal of the Atmospheric Sciences},
- volume = {56},
- number = {24},
- pages = {4167-4182},
- year = {1999},
- doi = {10.1175/1520-0469(1999)056<4167:ASPOMF>2.0.CO;2},
- URL = {https://doi.org/10.1175/1520-0469(1999)056<4167:ASPOMF>2.0.CO;2},
- eprint = {https://doi.org/10.1175/1520-0469(1999)056<4167:ASPOMF>2.0.CO;2}}
+ Author = {Alexander, M. J. and Dunkerton, T. J.},
+ Doi = {10.1175/1520-0469(1999)056<4167:ASPOMF>2.0.CO;2},
+ Eprint = {https://doi.org/10.1175/1520-0469(1999)056<4167:ASPOMF>2.0.CO;2},
+ Journal = {Journal of the Atmospheric Sciences},
+ Number = {24},
+ Pages = {4167-4182},
+ Title = {A Spectral Parameterization of Mean-Flow Forcing due to Breaking Gravity Waves},
+ Url = {https://doi.org/10.1175/1520-0469(1999)056<4167:ASPOMF>2.0.CO;2},
+ Volume = {56},
+ Year = {1999},
+ Bdsk-Url-1 = {https://doi.org/10.1175/1520-0469(1999)056%3C4167:ASPOMF%3E2.0.CO;2},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1175/1520-0469(1999)056%3C4167:ASPOMF%3E2.0.CO;2}}
@article{scinocca_2003,
- author = {Scinocca, John F.},
- title = {An Accurate Spectral Nonorographic Gravity Wave Drag Parameterization for General Circulation Models},
- journal = {Journal of the Atmospheric Sciences},
- volume = {60},
- number = {4},
- pages = {667-682},
- year = {2003},
- doi = {10.1175/1520-0469(2003)060<0667:AASNGW>2.0.CO;2},
- URL = {https://doi.org/10.1175/1520-0469(2003)060<0667:AASNGW>2.0.CO;2},
- eprint = {https://doi.org/10.1175/1520-0469(2003)060<0667:AASNGW>2.0.CO;2}}
+ Author = {Scinocca, John F.},
+ Doi = {10.1175/1520-0469(2003)060<0667:AASNGW>2.0.CO;2},
+ Eprint = {https://doi.org/10.1175/1520-0469(2003)060<0667:AASNGW>2.0.CO;2},
+ Journal = {Journal of the Atmospheric Sciences},
+ Number = {4},
+ Pages = {667-682},
+ Title = {An Accurate Spectral Nonorographic Gravity Wave Drag Parameterization for General Circulation Models},
+ Url = {https://doi.org/10.1175/1520-0469(2003)060<0667:AASNGW>2.0.CO;2},
+ Volume = {60},
+ Year = {2003},
+ Bdsk-Url-1 = {https://doi.org/10.1175/1520-0469(2003)060%3C0667:AASNGW%3E2.0.CO;2},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1175/1520-0469(2003)060%3C0667:AASNGW%3E2.0.CO;2}}
@article{shaw_and_shepherd_2009,
- author = {Shaw, Tiffany A. and Shepherd, Theodore G.},
- title = {A Theoretical Framework for Energy and Momentum Consistency in Subgrid-Scale Parameterization for Climate Models},
- journal = {Journal of the Atmospheric Sciences},
- volume = {66},
- number = {10},
- pages = {3095-3114},
- year = {2009},
- doi = {10.1175/2009JAS3051.1},
- URL = {https://doi.org/10.1175/2009JAS3051.1},
- eprint = {https://doi.org/10.1175/2009JAS3051.1}}
-
-@Article{molod_et_al_2015,
- AUTHOR = {Molod, A. and Takacs, L. and Suarez, M. and Bacmeister, J.},
- TITLE = {Development of the GEOS-5 atmospheric general circulation model: evolution from MERRA to MERRA2},
- JOURNAL = {Geoscientific Model Development},
- VOLUME = {8},
- YEAR = {2015},
- NUMBER = {5},
- PAGES = {1339--1356},
- URL = {https://www.geosci-model-dev.net/8/1339/2015/},
- DOI = {10.5194/gmd-8-1339-2015}}
+ Author = {Shaw, Tiffany A. and Shepherd, Theodore G.},
+ Doi = {10.1175/2009JAS3051.1},
+ Eprint = {https://doi.org/10.1175/2009JAS3051.1},
+ Journal = {Journal of the Atmospheric Sciences},
+ Number = {10},
+ Pages = {3095-3114},
+ Title = {A Theoretical Framework for Energy and Momentum Consistency in Subgrid-Scale Parameterization for Climate Models},
+ Url = {https://doi.org/10.1175/2009JAS3051.1},
+ Volume = {66},
+ Year = {2009},
+ Bdsk-Url-1 = {https://doi.org/10.1175/2009JAS3051.1},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1175/2009JAS3051.1}}
+
+@article{molod_et_al_2015,
+ Author = {Molod, A. and Takacs, L. and Suarez, M. and Bacmeister, J.},
+ Doi = {10.5194/gmd-8-1339-2015},
+ Journal = {Geoscientific Model Development},
+ Number = {5},
+ Pages = {1339--1356},
+ Title = {Development of the GEOS-5 atmospheric general circulation model: evolution from MERRA to MERRA2},
+ Url = {https://www.geosci-model-dev.net/8/1339/2015/},
+ Volume = {8},
+ Year = {2015},
+ Bdsk-Url-1 = {https://www.geosci-model-dev.net/8/1339/2015/},
+ Bdsk-Url-2 = {http://dx.doi.org/10.5194/gmd-8-1339-2015}}
@article{richter_et_al_2010,
- author = {Richter, Jadwiga H. and Sassi, Fabrizio and Garcia, Rolando R.},
- title = {Toward a Physically Based Gravity Wave Source Parameterization in a General Circulation Model},
- journal = {Journal of the Atmospheric Sciences},
- volume = {67},
- number = {1},
- pages = {136-156},
- year = {2010},
- doi = {10.1175/2009JAS3112.1},
- URL = {https://doi.org/10.1175/2009JAS3112.1},
- eprint = {https://doi.org/10.1175/2009JAS3112.1}}
+ Author = {Richter, Jadwiga H. and Sassi, Fabrizio and Garcia, Rolando R.},
+ Doi = {10.1175/2009JAS3112.1},
+ Eprint = {https://doi.org/10.1175/2009JAS3112.1},
+ Journal = {Journal of the Atmospheric Sciences},
+ Number = {1},
+ Pages = {136-156},
+ Title = {Toward a Physically Based Gravity Wave Source Parameterization in a General Circulation Model},
+ Url = {https://doi.org/10.1175/2009JAS3112.1},
+ Volume = {67},
+ Year = {2010},
+ Bdsk-Url-1 = {https://doi.org/10.1175/2009JAS3112.1},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1175/2009JAS3112.1}}
@article{richter_et_al_2014,
- author = {Richter, Jadwiga H. and Solomon, Abraham and Bacmeister, Julio T.},
- title = {Effects of vertical resolution and nonorographic gravity wave drag on the simulated climate in the Community Atmosphere Model, version 5},
- journal = {Journal of Advances in Modeling Earth Systems},
- volume = {6},
- number = {2},
- pages = {357-383},
- keywords = {climate modeling, vertical resolution, modeling, climate, global circulation model, general circulation model},
- doi = {10.1002/2013MS000303},
- url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2013MS000303},
- eprint = {https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1002/2013MS000303},
- year = {2014}}
+ Author = {Richter, Jadwiga H. and Solomon, Abraham and Bacmeister, Julio T.},
+ Doi = {10.1002/2013MS000303},
+ Eprint = {https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1002/2013MS000303},
+ Journal = {Journal of Advances in Modeling Earth Systems},
+ Keywords = {climate modeling, vertical resolution, modeling, climate, global circulation model, general circulation model},
+ Number = {2},
+ Pages = {357-383},
+ Title = {Effects of vertical resolution and nonorographic gravity wave drag on the simulated climate in the Community Atmosphere Model, version 5},
+ Url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2013MS000303},
+ Volume = {6},
+ Year = {2014},
+ Bdsk-Url-1 = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2013MS000303},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1002/2013MS000303}}
@article{gelaro_et_al_2017,
- author = {Gelaro, et al.},
- title = {The Modern-Era Retrospective Analysis for Research and Applications, Version 2 (MERRA-2)},
- journal = {Journal of Climate},
- volume = {30},
- number = {14},
- pages = {5419-5454},
- year = {2017},
- doi = {10.1175/JCLI-D-16-0758.1},
- URL = {https://doi.org/10.1175/JCLI-D-16-0758.1},
- eprint = {https://doi.org/10.1175/JCLI-D-16-0758.1}}
+ Author = {Gelaro, et al.},
+ Doi = {10.1175/JCLI-D-16-0758.1},
+ Eprint = {https://doi.org/10.1175/JCLI-D-16-0758.1},
+ Journal = {Journal of Climate},
+ Number = {14},
+ Pages = {5419-5454},
+ Title = {The Modern-Era Retrospective Analysis for Research and Applications, Version 2 (MERRA-2)},
+ Url = {https://doi.org/10.1175/JCLI-D-16-0758.1},
+ Volume = {30},
+ Year = {2017},
+ Bdsk-Url-1 = {https://doi.org/10.1175/JCLI-D-16-0758.1},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1175/JCLI-D-16-0758.1}}
@article{garcia_et_al_2007,
- author = {Garcia, R. R. and Marsh, D. R. and Kinnison, D. E. and Boville, B. A. and Sassi, F.},
- title = {Simulation of secular trends in the middle atmosphere, 1950–2003},
- journal = {Journal of Geophysical Research: Atmospheres},
- volume = {112},
- number = {D9},
- pages = {},
- keywords = {global change, ozone depletion, water vapor trends, temperature trends},
- doi = {10.1029/2006JD007485},
- url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2006JD007485},
- eprint = {https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1029/2006JD007485},
- year = {2007}}
+ Author = {Garcia, R. R. and Marsh, D. R. and Kinnison, D. E. and Boville, B. A. and Sassi, F.},
+ Doi = {10.1029/2006JD007485},
+ Eprint = {https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1029/2006JD007485},
+ Journal = {Journal of Geophysical Research: Atmospheres},
+ Keywords = {global change, ozone depletion, water vapor trends, temperature trends},
+ Number = {D9},
+ Title = {Simulation of secular trends in the middle atmosphere, 1950--2003},
+ Url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2006JD007485},
+ Volume = {112},
+ Year = {2007},
+ Bdsk-Url-1 = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2006JD007485},
+ Bdsk-Url-2 = {http://dx.doi.org/10.1029/2006JD007485}}
@article{eckermann_et_al_2009,
- title = "High-altitude data assimilation system experiments for the northern summer mesosphere season of 2007",
- journal = "Journal of Atmospheric and Solar-Terrestrial Physics",
- volume = "71",
- number = "3",
- pages = "531 - 551",
- year = "2009",
- note = "Global Perspectives on the Aeronomy of the Summer Mesopause Region",
- issn = "1364-6826",
- doi = "https://doi.org/10.1016/j.jastp.2008.09.036",
- url = "http://www.sciencedirect.com/science/article/pii/S1364682608002575",
- author = "Stephen D. Eckermann and Karl W. Hoppel and Lawrence Coy and John P. McCormack and David E. Siskind and Kim Nielsen and Andrew Kochenash and Michael H. Stevens and Christoph R. Englert and Werner Singer and Mark Hervig",
- keywords = "Data assimilation, Polar mesospheric cloud, Tide, Planetary wave, Mesosphere",}
+ Author = {Stephen D. Eckermann and Karl W. Hoppel and Lawrence Coy and John P. McCormack and David E. Siskind and Kim Nielsen and Andrew Kochenash and Michael H. Stevens and Christoph R. Englert and Werner Singer and Mark Hervig},
+ Doi = {https://doi.org/10.1016/j.jastp.2008.09.036},
+ Issn = {1364-6826},
+ Journal = {Journal of Atmospheric and Solar-Terrestrial Physics},
+ Keywords = {Data assimilation, Polar mesospheric cloud, Tide, Planetary wave, Mesosphere},
+ Note = {Global Perspectives on the Aeronomy of the Summer Mesopause Region},
+ Number = {3},
+ Pages = {531 - 551},
+ Title = {High-altitude data assimilation system experiments for the northern summer mesosphere season of 2007},
+ Url = {http://www.sciencedirect.com/science/article/pii/S1364682608002575},
+ Volume = {71},
+ Year = {2009},
+ Bdsk-Url-1 = {http://www.sciencedirect.com/science/article/pii/S1364682608002575},
+ Bdsk-Url-2 = {https://doi.org/10.1016/j.jastp.2008.09.036}}
@inproceedings{alpert_et_al_2019,
- title={Atmospheric Gravity Wave Sources Correlated with Resolved-scale GW Activity and Sub-grid Scale Parameterization in the FV3gfs Model},
- author={Alpert, Jordan C and Yudin, Valery A and Strobach, Edward},
- booktitle={AGU Fall Meeting 2019},
- year={2019},
- organization={AGU}}
-
-@Article{ern_et_al_2018,
- AUTHOR = {Ern, M. and Trinh, Q. T. and Preusse, P. and Gille, J. C. and Mlynczak, M. G. and Russell III, J. M. and Riese, M.},
- TITLE = {GRACILE: a comprehensive climatology of atmospheric gravity wave parameters based on satellite limb soundings},
- JOURNAL = {Earth System Science Data},
- VOLUME = {10},
- YEAR = {2018},
- NUMBER = {2},
- PAGES = {857--892},
- URL = {https://www.earth-syst-sci-data.net/10/857/2018/},
- DOI = {10.5194/essd-10-857-2018}}
+ Author = {Alpert, Jordan C and Yudin, Valery A and Strobach, Edward},
+ Booktitle = {AGU Fall Meeting 2019},
+ Organization = {AGU},
+ Title = {Atmospheric Gravity Wave Sources Correlated with Resolved-scale GW Activity and Sub-grid Scale Parameterization in the FV3gfs Model},
+ Year = {2019}}
+
+@article{ern_et_al_2018,
+ Author = {Ern, M. and Trinh, Q. T. and Preusse, P. and Gille, J. C. and Mlynczak, M. G. and Russell III, J. M. and Riese, M.},
+ Doi = {10.5194/essd-10-857-2018},
+ Journal = {Earth System Science Data},
+ Number = {2},
+ Pages = {857--892},
+ Title = {GRACILE: a comprehensive climatology of atmospheric gravity wave parameters based on satellite limb soundings},
+ Url = {https://www.earth-syst-sci-data.net/10/857/2018/},
+ Volume = {10},
+ Year = {2018},
+ Bdsk-Url-1 = {https://www.earth-syst-sci-data.net/10/857/2018/},
+ Bdsk-Url-2 = {http://dx.doi.org/10.5194/essd-10-857-2018}}
@inproceedings{yudin_et_al_2019,
- title={Longitudinal Variability of Wave Dynamics in Weather Models Extended into the Mesosphere and Thermosphere},
- author={Yudin V.A. , S. I. Karol, R.A. Akmaev, T. Fuller-Rowell, D. Kleist, A. Kubaryk, and C. Thompson},
- booktitle={Space Weather Workshop},
- year={2019},}
+ Author = {Yudin V.A. , S. I. Karol, R.A. Akmaev, T. Fuller-Rowell, D. Kleist, A. Kubaryk, and C. Thompson},
+ Booktitle = {Space Weather Workshop},
+ Title = {Longitudinal Variability of Wave Dynamics in Weather Models Extended into the Mesosphere and Thermosphere},
+ Year = {2019}}
diff --git a/physics/docs/pdftxt/GFS_OCEAN.txt b/physics/docs/pdftxt/GFS_OCEAN.txt
new file mode 100644
index 000000000..813adf71c
--- /dev/null
+++ b/physics/docs/pdftxt/GFS_OCEAN.txt
@@ -0,0 +1,16 @@
+/**
+\page GFS_OCEAN GFS Simple Ocean Scheme
+\section des_sfcocean Description
+
+The Sea Surface Temperature (SST) is a required filed in Numerical Weather Prediciton (NWP) systems because it
+functions as the lower foundary condition for the calculation of air-sea heat fluxes. When the GFS Simple Ocean
+Scheme is evoked, the SST is kept constant throughout the forecast.
+
+\section intra_sfcocean Intraphysics Communication
+\ref arg_table_sfc_ocean_run
+
+
+
+
+
+*/
diff --git a/physics/docs/pdftxt/GFS_UGWPv0.txt b/physics/docs/pdftxt/GFS_UGWPv0.txt
index d17b19e9e..e6ea3b6f4 100644
--- a/physics/docs/pdftxt/GFS_UGWPv0.txt
+++ b/physics/docs/pdftxt/GFS_UGWPv0.txt
@@ -112,6 +112,6 @@ and dynamical instability of waves described by the linear
\ref arg_table_cires_ugwp_run
\section gen_al_ugwpv0 General Algorithm
-\ref gen_cires_ugwp_run
+\ref gen_cires_ugwp
*/
diff --git a/physics/docs/pdftxt/GFSv15p2_no_nsst_suite.txt b/physics/docs/pdftxt/GFSv15p2_no_nsst_suite.txt
new file mode 100644
index 000000000..982afc860
--- /dev/null
+++ b/physics/docs/pdftxt/GFSv15p2_no_nsst_suite.txt
@@ -0,0 +1,127 @@
+/**
+\page GFS_v15p2_no_nsst_page GFS_v15p2_no_nsst Suite
+
+\section gfsv15_no_nsst_suite_overview Overview
+
+Suite GFS_v15p2_no_nsst is a companion suite of GFS_v15p2 with GRIB2 data initialization.
+
+The GFS_v15p2_no_nsst physics suite uses the parameterizations in the following order:
+ - \ref GFS_RRTMG
+ - \ref GFS_SFCLYR
+ - \ref GFS_OCEAN
+ - \ref GFS_NOAH
+ - \ref GFS_SFCSICE
+ - \ref GFS_HEDMF
+ - \ref GFS_UGWP_v0
+ - \ref GFS_RAYLEIGH
+ - \ref GFS_OZPHYS
+ - \ref GFS_H2OPHYS
+ - \ref GFS_SAMFdeep
+ - \ref GFS_SAMFshal
+ - \ref GFDL_cloud
+ - \ref GFS_CALPRECIPTYPE
+
+\section sdf_gfsv15p2_no_nsst Suite Definition File
+- For GRIB2 initialization data: \subpage suite_FV3_GFS_v15p2_no_nsst_xml
+
+\section gfs15p2nonsst_nml_opt_des Namelist
+
+- \b &gfs_physics_nml
+\n \c fhzero = 6
+\n \c h2o_phys = .true.
+\n \c ldiag3d = .false.
+\n \c fhcyc = 24
+\n \c use_ufo = .true.
+\n \c pre_rad = .false.
+\n \c ncld = 5
+\n \c imp_physics = 11
+\n \c pdfcld = .false.
+\n \c fhswr = 3600.
+\n \c fhlwr = 3600.
+\n \c ialb = 1
+\n \c iems = 1
+\n \c iaer = 111
+\n \c ico2 = 2
+\n \c isubc_sw = 2
+\n \c isubc_lw = 2
+\n \c isol = 2
+\n \c lwhtr = .true.
+\n \c swhtr = .true.
+\n \c cnvgwd = .true.
+\n \c shal_cnv = .true.
+\n \c cal_pre = .false.
+\n \c redrag = .true.
+\n \c dspheat = .true.
+\n \c hybedmf = .true.
+\n \c random_clds = .false.
+\n \c trans_trac = .true.
+\n \c cnvcld = .true.
+\n \c imfshalcnv = 2
+\n \c imfdeepcnv = 2
+\n \c cdmbgwd = 3.5,0.25 [1.0,1.2] [0.2,2.5] [0.125,3.0] ! [C768] [C384] [C192] [C96]L64
+\n \c prslrd0 = 0.
+\n \c ivegsrc = 1
+\n \c isot = 1
+\n \c debug = .false.
+\n \c oz_phys = .F.
+\n \c oz_phys_2015 = .T.
+\n \c nstf_name = 0,0,0,0,0
+\n \c nst_anl = .true.
+\n \c psautco = 0.0008,0.0005
+\n \c prautco = 0.00015,0.00015
+\n \c lgfdlmprad = .true.
+\n \c effr_in = .true.
+\n \c do_sppt = .false.
+\n \c do_shum = .false.
+\n \c do_skeb = .false.
+\n \c do_sfcperts = .false.
+
+- \b &gfdl_cloud_microphysics_nml
+\n \c sedi_transport = .true.
+\n \c do_sedi_heat = .false.
+\n \c rad_snow = .true.
+\n \c rad_graupel = .true.
+\n \c rad_rain = .true.
+\n \c const_vi = .F.
+\n \c const_vs = .F.
+\n \c const_vg = .F.
+\n \c const_vr = .F.
+\n \c vi_max = 1.
+\n \c vs_max = 2.
+\n \c vg_max = 12.
+\n \c vr_max = 12.
+\n \c qi_lim = 1.
+\n \c prog_ccn = .false.
+\n \c do_qa = .true.
+\n \c fast_sat_adj = .true.
+\n \c tau_l2v = 225.
+\n \c tau_v2l = 150.
+\n \c tau_g2v = 900.
+\n \c rthresh = 10.e-6
+\n \c dw_land = 0.16
+\n \c dw_ocean = 0.10
+\n \c ql_gen = 1.0e-3
+\n \c ql_mlt = 1.0e-3
+\n \c qi0_crt = 8.0E-5
+\n \c qs0_crt = 1.0e-3
+\n \c tau_i2s = 1000.
+\n \c c_psaci = 0.05
+\n \c c_pgacs = 0.01
+\n \c rh_inc = 0.30
+\n \c rh_inr = 0.30
+\n \c rh_ins = 0.30
+\n \c ccn_l = 300.
+\n \c ccn_o = 100.
+\n \c c_paut = 0.5
+\n \c c_cracw = 0.8
+\n \c use_ppm = .false.
+\n \c use_ccn = .true.
+\n \c mono_prof = .true.
+\n \c z_slope_liq = .true.
+\n \c z_slope_ice = .true.
+\n \c de_ice = .false.
+\n \c fix_negative = .true.
+\n \c icloud_f = 1
+\n \c mp_time = 150.
+
+*/
diff --git a/physics/docs/pdftxt/GFSv15p2_suite.txt b/physics/docs/pdftxt/GFSv15p2_suite.txt
index ef0f0829d..944fd49f1 100644
--- a/physics/docs/pdftxt/GFSv15p2_suite.txt
+++ b/physics/docs/pdftxt/GFSv15p2_suite.txt
@@ -10,6 +10,7 @@ The GFS_v15p2 physics suite uses the parameterizations in the following order:
- \ref GFS_RRTMG
- \ref GFS_SFCLYR
- \ref GFS_NSST
+ - \ref GFS_OCEAN
- \ref GFS_NOAH
- \ref GFS_SFCSICE
- \ref GFS_HEDMF
@@ -23,205 +24,110 @@ The GFS_v15p2 physics suite uses the parameterizations in the following order:
- \ref GFS_CALPRECIPTYPE
\section sdf_gfsv15p2 Suite Definition File
-\code
-
-
-
-
-
-
- fv_sat_adj
-
-
-
-
- GFS_time_vary_pre
- GFS_rrtmg_setup
- GFS_rad_time_vary
- GFS_phys_time_vary
-
-
-
-
- GFS_suite_interstitial_rad_reset
- GFS_rrtmg_pre
- rrtmg_sw_pre
- rrtmg_sw
- rrtmg_sw_post
- rrtmg_lw_pre
- rrtmg_lw
- rrtmg_lw_post
- GFS_rrtmg_post
-
-
-
-
- GFS_suite_interstitial_phys_reset
- GFS_suite_stateout_reset
- get_prs_fv3
- GFS_suite_interstitial_1
- GFS_surface_generic_pre
- GFS_surface_composites_pre
- dcyc2t3
- GFS_surface_composites_inter
- GFS_suite_interstitial_2
-
-
-
- sfc_diff
- GFS_surface_loop_control_part1
- sfc_nst_pre
- sfc_nst
- sfc_nst_post
- lsm_noah
- sfc_sice
- GFS_surface_loop_control_part2
-
-
-
- GFS_surface_composites_post
- dcyc2t3_post
- sfc_diag
- sfc_diag_post
- GFS_surface_generic_post
- GFS_PBL_generic_pre
- hedmf
- GFS_PBL_generic_post
- GFS_GWD_generic_pre
- cires_ugwp
- cires_ugwp_post
- GFS_GWD_generic_post
- rayleigh_damp
- GFS_suite_stateout_update
- ozphys_2015
- h2ophys
- GFS_DCNV_generic_pre
- get_phi_fv3
- GFS_suite_interstitial_3
- samfdeepcnv
- GFS_DCNV_generic_post
- GFS_SCNV_generic_pre
- samfshalcnv
- GFS_SCNV_generic_post
- GFS_suite_interstitial_4
- cnvc90
- GFS_MP_generic_pre
- gfdl_cloud_microphys
- GFS_MP_generic_post
- maximum_hourly_diagnostics
-
-
-
-
- GFS_stochastics
-
-
-
-
-\endcode
+- For NEMSIO initialization data: \subpage suite_FV3_GFS_v15p2_xml
\section gfs15p2_nml_opt_des Namelist
-\code
-&gfs_physics_nml
- fhzero = 6
- h2o_phys = .true.
- ldiag3d = .false.
- fhcyc = 24
- use_ufo = .true.
- pre_rad = .false.
- ncld = 5
- imp_physics = 11
- pdfcld = .false.
- fhswr = 3600.
- fhlwr = 3600.
- ialb = 1
- iems = 1
- iaer = 111
- ico2 = 2
- isubc_sw = 2
- isubc_lw = 2
- isol = 2
- lwhtr = .true.
- swhtr = .true.
- cnvgwd = .true.
- shal_cnv = .true.
- cal_pre = .false.
- redrag = .true.
- dspheat = .true.
- hybedmf = .true.
- random_clds = .false.
- trans_trac = .true.
- cnvcld = .true.
- imfshalcnv = 2
- imfdeepcnv = 2
- cdmbgwd = 3.5,0.25
- prslrd0 = 0.
- ivegsrc = 1
- isot = 1
- debug = .false.
- oz_phys = .F.
- oz_phys_2015 = .T.
- nstf_name = 2,1,0,0,0
- nst_anl = .true.
- psautco = 0.0008,0.0005
- prautco = 0.00015,0.00015
- lgfdlmprad = .true.
- effr_in = .true.
- do_sppt = .T.
- do_shum = .T.
- do_skeb = .T.
- do_sfcperts = .F.
-/
+- \b &gfs_physics_nml
+\n \c fhzero = 6
+\n \c h2o_phys = .true.
+\n \c ldiag3d = .false.
+\n \c fhcyc = 24
+\n \c use_ufo = .true.
+\n \c pre_rad = .false.
+\n \c ncld = 5
+\n \c imp_physics = 11
+\n \c pdfcld = .false.
+\n \c fhswr = 3600.
+\n \c fhlwr = 3600.
+\n \c ialb = 1
+\n \c iems = 1
+\n \c iaer = 111
+\n \c ico2 = 2
+\n \c isubc_sw = 2
+\n \c isubc_lw = 2
+\n \c isol = 2
+\n \c lwhtr = .true.
+\n \c swhtr = .true.
+\n \c cnvgwd = .true.
+\n \c shal_cnv = .true.
+\n \c cal_pre = .false.
+\n \c redrag = .true.
+\n \c dspheat = .true.
+\n \c hybedmf = .true.
+\n \c random_clds = .false.
+\n \c trans_trac = .true.
+\n \c cnvcld = .true.
+\n \c imfshalcnv = 2
+\n \c imfdeepcnv = 2
+\n \c cdmbgwd = 3.5,0.25 [1.0,1.2] [0.2,2.5] [0.125,3.0] ! [C768] [C384] [C192] [C96]L64
+\n \c prslrd0 = 0.
+\n \c ivegsrc = 1
+\n \c isot = 1
+\n \c debug = .false.
+\n \c oz_phys = .F.
+\n \c oz_phys_2015 = .T.
+\n \c nstf_name = @[NSTF_NAME]
+\n \c nst_anl = .true.
+\n \c psautco = 0.0008,0.0005
+\n \c prautco = 0.00015,0.00015
+\n \c lgfdlmprad = .true.
+\n \c effr_in = .true.
+\n \c do_sppt = .false.
+\n \c do_shum = .false.
+\n \c do_skeb = .false.
+\n \c do_sfcperts = .false.
+
+- \b &gfdl_cloud_microphysics_nml
+\n \c sedi_transport = .true.
+\n \c do_sedi_heat = .false.
+\n \c rad_snow = .true.
+\n \c rad_graupel = .true.
+\n \c rad_rain = .true.
+\n \c const_vi = .F.
+\n \c const_vs = .F.
+\n \c const_vg = .F.
+\n \c const_vr = .F.
+\n \c vi_max = 1.
+\n \c vs_max = 2.
+\n \c vg_max = 12.
+\n \c vr_max = 12.
+\n \c qi_lim = 1.
+\n \c prog_ccn = .false.
+\n \c do_qa = .true.
+\n \c fast_sat_adj = .true.
+\n \c tau_l2v = 225.
+\n \c tau_v2l = 150.
+\n \c tau_g2v = 900.
+\n \c rthresh = 10.e-6
+\n \c dw_land = 0.16
+\n \c dw_ocean = 0.10
+\n \c ql_gen = 1.0e-3
+\n \c ql_mlt = 1.0e-3
+\n \c qi0_crt = 8.0E-5
+\n \c qs0_crt = 1.0e-3
+\n \c tau_i2s = 1000.
+\n \c c_psaci = 0.05
+\n \c c_pgacs = 0.01
+\n \c rh_inc = 0.30
+\n \c rh_inr = 0.30
+\n \c rh_ins = 0.30
+\n \c ccn_l = 300.
+\n \c ccn_o = 100.
+\n \c c_paut = 0.5
+\n \c c_cracw = 0.8
+\n \c use_ppm = .false.
+\n \c use_ccn = .true.
+\n \c mono_prof = .true.
+\n \c z_slope_liq = .true.
+\n \c z_slope_ice = .true.
+\n \c de_ice = .false.
+\n \c fix_negative = .true.
+\n \c icloud_f = 1
+\n \c mp_time = 150.
-&gfdl_cloud_microphysics_nml
- sedi_transport = .true.
- do_sedi_heat = .false.
- rad_snow = .true.
- rad_graupel = .true.
- rad_rain = .true.
- const_vi = .F.
- const_vs = .F.
- const_vg = .F.
- const_vr = .F.
- vi_max = 1.
- vs_max = 2.
- vg_max = 12.
- vr_max = 12.
- qi_lim = 1.
- prog_ccn = .false.
- do_qa = .true.
- fast_sat_adj = .true.
- tau_l2v = 225.
- tau_v2l = 150.
- tau_g2v = 900.
- rthresh = 10.e-6
- dw_land = 0.16
- dw_ocean = 0.10
- ql_gen = 1.0e-3
- ql_mlt = 1.0e-3
- qi0_crt = 8.0E-5
- qs0_crt = 1.0e-3
- tau_i2s = 1000.
- c_psaci = 0.05
- c_pgacs = 0.01
- rh_inc = 0.30
- rh_inr = 0.30
- rh_ins = 0.30
- ccn_l = 300.
- ccn_o = 100.
- c_paut = 0.5
- c_cracw = 0.8
- use_ppm = .false.
- use_ccn = .true.
- mono_prof = .true.
- z_slope_liq = .true.
- z_slope_ice = .true.
- de_ice = .false.
- fix_negative = .true.
- icloud_f = 1
- mp_time = 150.
-/
-\endcode
+\note nstf_name = \f$[2,0,0,0,0]^1 [2,1,0,0,0]^2 \f$
+- \f$^1\f$ NSST is on and coupled with spin up off
+- \f$^2\f$ NSST is on and coupled with spin up on
*/
diff --git a/physics/docs/pdftxt/GFSv16beta_no_nsst_suite.txt b/physics/docs/pdftxt/GFSv16beta_no_nsst_suite.txt
new file mode 100644
index 000000000..3e5205199
--- /dev/null
+++ b/physics/docs/pdftxt/GFSv16beta_no_nsst_suite.txt
@@ -0,0 +1,167 @@
+/**
+\page GFS_v16beta_no_nsst_page GFS_v16beta_no_nsst Suite
+
+\section gfsv16beta_no_nsst_suite_overview Overview
+
+Suite GFS_v16beta_no_nsst is a companion suite of GFS_v16beta with GRIB2 data initialization.
+
+The GFS_v16beta_no_nsst physics suite uses the parameterizations in the following order:
+ - \ref GFS_RRTMG
+ - \ref GFS_SFCLYR
+ - \ref GFS_OCEAN
+ - \ref GFS_NOAH
+ - \ref GFS_SFCSICE
+ - \ref GFS_SATMEDMFVDIFQ
+ - \ref GFS_UGWP_v0
+ - \ref GFS_RAYLEIGH
+ - \ref GFS_OZPHYS
+ - \ref GFS_H2OPHYS
+ - \ref GFS_SAMFdeep
+ - \ref GFS_SAMFshal
+ - \ref GFDL_cloud
+ - \ref GFS_CALPRECIPTYPE
+
+\section sdf_gfsv16bnonsst Suite Definition File
+- For GRIB2 initialization data: \subpage suite_FV3_GFS_v16beta_no_nsst_xml
+
+\section gfs16betanonsst_nml_opt_des Namelist
+
+- \b &gfs_physics_nml
+\n \c fhzero = 6
+\n \c h2o_phys = .true.
+\n \c ldiag3d = .false.
+\n \c fhcyc = 24
+\n \c use_ufo = .true.
+\n \c pre_rad = .false.
+\n \c ncld = 5
+\n \c imp_physics = 11
+\n \c pdfcld = .false.
+\n \c fhswr = 3600.
+\n \c fhlwr = 3600.
+\n \c ialb = 1
+\n \c iems = 1
+\n \c iaer = 5111
+\n \c icliq_sw = 2
+\n \c iovr_lw = 3
+\n \c iovr_sw = 3
+\n \c ico2 = 2
+\n \c isubc_sw = 2
+\n \c isubc_lw = 2
+\n \c isol = 2
+\n \c lwhtr = .true.
+\n \c swhtr = .true.
+\n \c cnvgwd = .true.
+\n \c shal_cnv = .true.
+\n \c cal_pre = .false.
+\n \c redrag = .true.
+\n \c dspheat = .true.
+\n \c hybedmf = .false.
+\n \c satmedmf = .true.
+\n \c isatmedmf = 1
+\n \c lheatstrg = .true.
+\n \c random_clds = .false.
+\n \c trans_trac = .true.
+\n \c cnvcld = .true.
+\n \c imfshalcnv = 2
+\n \c imfdeepcnv = 2
+\n \c cdmbgwd = 4.0,0.15,1.0,1.0 [1.1,0.72,1.0,1.0] [0.23,1.5,1.0,1.0] [0.14,1.8,1.0,1.0] ! [C768] [C384] [C192] [C96]L64
+\n \c prslrd0 = 0.
+\n \c ivegsrc = 1
+\n \c isot = 1
+\n \c lsoil = 4
+\n \c lsm = 1
+\n \c iopt_dveg = 1
+\n \c iopt_crs = 1
+\n \c iopt_btr = 1
+\n \c iopt_run = 1
+\n \c iopt_sfc = 1
+\n \c iopt_frz = 1
+\n \c iopt_inf = 1
+\n \c iopt_rad = 1
+\n \c iopt_alb = 2
+\n \c iopt_snf = 4
+\n \c iopt_tbot = 2
+\n \c iopt_stc = 1
+\n \c debug = .false.
+\n \c oz_phys = .F.
+\n \c oz_phys_2015 = .T.
+\n \c nstf_name = 0,0,0,0,0
+\n \c nst_anl = .true.
+\n \c psautco = 0.0008,0.0005
+\n \c prautco = 0.00015,0.00015
+\n \c lgfdlmprad = .true.
+\n \c effr_in = .true.
+\n \c ldiag_ugwp = .false.
+\n \c do_ugwp = .false.
+\n \c do_tofd = .true.
+\n \c do_sppt = .false.
+\n \c do_shum = .false.
+\n \c do_skeb = .false.
+\n \c do_sfcperts = .false.
+
+
+- \b &gfdl_cloud_microphysics_nml
+\n \c sedi_transport = .true.
+\n \c do_sedi_heat = .false.
+\n \c rad_snow = .true.
+\n \c rad_graupel = .true.
+\n \c rad_rain = .true.
+\n \c const_vi = .F.
+\n \c const_vs = .F.
+\n \c const_vg = .F.
+\n \c const_vr = .F.
+\n \c vi_max = 1.
+\n \c vs_max = 2.
+\n \c vg_max = 12.
+\n \c vr_max = 12.
+\n \c qi_lim = 1.
+\n \c prog_ccn = .false.
+\n \c do_qa = .true.
+\n \c fast_sat_adj = .true.
+\n \c tau_l2v = 225.
+\n \c tau_v2l = 150.
+\n \c tau_g2v = 900.
+\n \c rthresh = 10.e-6
+\n \c dw_land = 0.16
+\n \c dw_ocean = 0.10
+\n \c ql_gen = 1.0e-3
+\n \c ql_mlt = 1.0e-3
+\n \c qi0_crt = 8.0E-5
+\n \c qs0_crt = 1.0e-3
+\n \c tau_i2s = 1000.
+\n \c c_psaci = 0.05
+\n \c c_pgacs = 0.01
+\n \c rh_inc = 0.30
+\n \c rh_inr = 0.30
+\n \c rh_ins = 0.30
+\n \c ccn_l = 300.
+\n \c ccn_o = 100.
+\n \c c_paut = 0.5
+\n \c c_cracw = 0.8
+\n \c use_ppm = .false.
+\n \c use_ccn = .true.
+\n \c mono_prof = .true.
+\n \c z_slope_liq = .true.
+\n \c z_slope_ice = .true.
+\n \c de_ice = .false.
+\n \c fix_negative = .true.
+\n \c icloud_f = 1
+\n \c mp_time = 150.
+\n \c reiflag = 2
+
+
+- \b &cires_ugwp_nml
+\n \c knob_ugwp_solver = 2
+\n \c knob_ugwp_source = 1,1,0,0
+\n \c knob_ugwp_wvspec = 1,25,25,25
+\n \c knob_ugwp_azdir = 2,4,4,4
+\n \c knob_ugwp_stoch = 0,0,0,0
+\n \c knob_ugwp_effac = 1,1,1,1
+\n \c knob_ugwp_doaxyz = 1
+\n \c knob_ugwp_doheat = 1
+\n \c knob_ugwp_dokdis = 1
+\n \c knob_ugwp_ndx4lh = 1
+\n \c knob_ugwp_version = 0
+\n \c launch_level = 27
+
+*/
diff --git a/physics/docs/pdftxt/GFSv16beta_suite.txt b/physics/docs/pdftxt/GFSv16beta_suite.txt
index b41d93f12..8389d0c40 100644
--- a/physics/docs/pdftxt/GFSv16beta_suite.txt
+++ b/physics/docs/pdftxt/GFSv16beta_suite.txt
@@ -13,6 +13,7 @@ The GFS_v16beta physics suite uses the parameterizations in the following order:
- \ref GFS_RRTMG
- \ref GFS_SFCLYR
- \ref GFS_NSST
+ - \ref GFS_OCEAN
- \ref GFS_NOAH
- \ref GFS_SFCSICE
- \ref GFS_SATMEDMFVDIFQ
@@ -26,246 +27,150 @@ The GFS_v16beta physics suite uses the parameterizations in the following order:
- \ref GFS_CALPRECIPTYPE
\section sdf_gfsv16b Suite Definition File
-\code
-
+- For NEMSIO initialization data: \subpage suite_FV3_GFS_v16beta_xml
-
-
-
-
- fv_sat_adj
-
-
-
-
- GFS_time_vary_pre
- GFS_rrtmg_setup
- GFS_rad_time_vary
- GFS_phys_time_vary
-
-
-
-
- GFS_suite_interstitial_rad_reset
- GFS_rrtmg_pre
- rrtmg_sw_pre
- rrtmg_sw
- rrtmg_sw_post
- rrtmg_lw_pre
- rrtmg_lw
- rrtmg_lw_post
- GFS_rrtmg_post
-
-
-
-
- GFS_suite_interstitial_phys_reset
- GFS_suite_stateout_reset
- get_prs_fv3
- GFS_suite_interstitial_1
- GFS_surface_generic_pre
- GFS_surface_composites_pre
- dcyc2t3
- GFS_surface_composites_inter
- GFS_suite_interstitial_2
-
-
-
- sfc_diff
- GFS_surface_loop_control_part1
- sfc_nst_pre
- sfc_nst
- sfc_nst_post
- lsm_noah
- sfc_sice
- GFS_surface_loop_control_part2
-
-
-
- GFS_surface_composites_post
- dcyc2t3_post
- sfc_diag
- sfc_diag_post
- GFS_surface_generic_post
- GFS_PBL_generic_pre
- satmedmfvdifq
- GFS_PBL_generic_post
- GFS_GWD_generic_pre
- cires_ugwp
- cires_ugwp_post
- GFS_GWD_generic_post
- rayleigh_damp
- GFS_suite_stateout_update
- ozphys_2015
- h2ophys
- GFS_DCNV_generic_pre
- get_phi_fv3
- GFS_suite_interstitial_3
- samfdeepcnv
- GFS_DCNV_generic_post
- GFS_SCNV_generic_pre
- samfshalcnv
- GFS_SCNV_generic_post
- GFS_suite_interstitial_4
- cnvc90
- GFS_MP_generic_pre
- gfdl_cloud_microphys
- GFS_MP_generic_post
- maximum_hourly_diagnostics
-
-
-
-
- GFS_stochastics
-
-
-
-
+\section gfs16beta_nml_opt_des Namelist
-\endcode
+- \b &gfs_physics_nml
+\n \c fhzero = 6
+\n \c h2o_phys = .true.
+\n \c ldiag3d = .false.
+\n \c fhcyc = 24
+\n \c use_ufo = .true.
+\n \c pre_rad = .false.
+\n \c ncld = 5
+\n \c imp_physics = 11
+\n \c pdfcld = .false.
+\n \c fhswr = 3600.
+\n \c fhlwr = 3600.
+\n \c ialb = 1
+\n \c iems = 1
+\n \c iaer = 5111
+\n \c icliq_sw = 2
+\n \c iovr_lw = 3
+\n \c iovr_sw = 3
+\n \c ico2 = 2
+\n \c isubc_sw = 2
+\n \c isubc_lw = 2
+\n \c isol = 2
+\n \c lwhtr = .true.
+\n \c swhtr = .true.
+\n \c cnvgwd = .true.
+\n \c shal_cnv = .true.
+\n \c cal_pre = .false.
+\n \c redrag = .true.
+\n \c dspheat = .true.
+\n \c hybedmf = .false.
+\n \c satmedmf = .true.
+\n \c isatmedmf = 1
+\n \c lheatstrg = .true.
+\n \c random_clds = .false.
+\n \c trans_trac = .true.
+\n \c cnvcld = .true.
+\n \c imfshalcnv = 2
+\n \c imfdeepcnv = 2
+\n \c cdmbgwd = 4.0,0.15,1.0,1.0 [1.1,0.72,1.0,1.0] [0.23,1.5,1.0,1.0] [0.14,1.8,1.0,1.0] ! [C768] [C384] [C192] [C96]L64
+\n \c prslrd0 = 0.
+\n \c ivegsrc = 1
+\n \c isot = 1
+\n \c lsoil = 4
+\n \c lsm = 1
+\n \c iopt_dveg = 1
+\n \c iopt_crs = 1
+\n \c iopt_btr = 1
+\n \c iopt_run = 1
+\n \c iopt_sfc = 1
+\n \c iopt_frz = 1
+\n \c iopt_inf = 1
+\n \c iopt_rad = 1
+\n \c iopt_alb = 2
+\n \c iopt_snf = 4
+\n \c iopt_tbot = 2
+\n \c iopt_stc = 1
+\n \c debug = .false.
+\n \c oz_phys = .F.
+\n \c oz_phys_2015 = .T.
+\n \c nstf_name = @[NSTF_NAME]
+\n \c nst_anl = .true.
+\n \c psautco = 0.0008,0.0005
+\n \c prautco = 0.00015,0.00015
+\n \c lgfdlmprad = .true.
+\n \c effr_in = .true.
+\n \c ldiag_ugwp = .false.
+\n \c do_ugwp = .false.
+\n \c do_tofd = .true.
+\n \c do_sppt = .false.
+\n \c do_shum = .false.
+\n \c do_skeb = .false.
+\n \c do_sfcperts = .false.
-\section gfs16beta_nml_opt_des Namelist
-\code
-&gfs_physics_nml
- fhzero = 6
- h2o_phys = .true.
- ldiag3d = .false.
- fhcyc = 24
- use_ufo = .true.
- pre_rad = .false.
- ncld = 5
- imp_physics = 11
- pdfcld = .false.
- fhswr = 3600.
- fhlwr = 3600.
- ialb = 1
- iems = 1
- iaer = 5111
- icliq_sw = 2
- iovr_lw = 3
- iovr_sw = 3
- ico2 = 2
- isubc_sw = 2
- isubc_lw = 2
- isol = 2
- lwhtr = .true.
- swhtr = .true.
- cnvgwd = .true.
- shal_cnv = .true.
- cal_pre = .false.
- redrag = .true.
- dspheat = .true.
- hybedmf = .false.
- satmedmf = .true.
- isatmedmf = 1
- lheatstrg = .true.
- random_clds = .false.
- trans_trac = .true.
- cnvcld = .true.
- imfshalcnv = 2
- imfdeepcnv = 2
- cdmbgwd = 4.0,0.15,1.0,1.0
- prslrd0 = 0.
- ivegsrc = 1
- isot = 1
- lsoil = 4
- lsm = 1
- iopt_dveg = 1
- iopt_crs = 1
- iopt_btr = 1
- iopt_run = 1
- iopt_sfc = 1
- iopt_frz = 1
- iopt_inf = 1
- iopt_rad = 1
- iopt_alb = 2
- iopt_snf = 4
- iopt_tbot = 2
- iopt_stc = 1
- debug = .false.
- oz_phys = .F.
- oz_phys_2015 = .T.
- nstf_name = 2,1,1,0,5
- nst_anl = .true.
- psautco = 0.0008,0.0005
- prautco = 0.00015,0.00015
- lgfdlmprad = .true.
- effr_in = .true.
- ldiag_ugwp = .false.
- do_ugwp = .false.
- do_tofd = .true.
- do_sppt = .true.
- do_shum = .true.
- do_skeb = .true.
- do_sfcperts = .false.
-/
-&gfdl_cloud_microphysics_nml
- sedi_transport = .true.
- do_sedi_heat = .false.
- rad_snow = .true.
- rad_graupel = .true.
- rad_rain = .true.
- const_vi = .F.
- const_vs = .F.
- const_vg = .F.
- const_vr = .F.
- vi_max = 1.
- vs_max = 2.
- vg_max = 12.
- vr_max = 12.
- qi_lim = 1.
- prog_ccn = .false.
- do_qa = .true.
- fast_sat_adj = .true.
- tau_l2v = 225.
- tau_v2l = 150.
- tau_g2v = 900.
- rthresh = 10.e-6
- dw_land = 0.16
- dw_ocean = 0.10
- ql_gen = 1.0e-3
- ql_mlt = 1.0e-3
- qi0_crt = 8.0E-5
- qs0_crt = 1.0e-3
- tau_i2s = 1000.
- c_psaci = 0.05
- c_pgacs = 0.01
- rh_inc = 0.30
- rh_inr = 0.30
- rh_ins = 0.30
- ccn_l = 300.
- ccn_o = 100.
- c_paut = 0.5
- c_cracw = 0.8
- use_ppm = .false.
- use_ccn = .true.
- mono_prof = .true.
- z_slope_liq = .true.
- z_slope_ice = .true.
- de_ice = .false.
- fix_negative = .true.
- icloud_f = 1
- mp_time = 150.
- reiflag = 2
-/
+- \b &gfdl_cloud_microphysics_nml
+\n \c sedi_transport = .true.
+\n \c do_sedi_heat = .false.
+\n \c rad_snow = .true.
+\n \c rad_graupel = .true.
+\n \c rad_rain = .true.
+\n \c const_vi = .F.
+\n \c const_vs = .F.
+\n \c const_vg = .F.
+\n \c const_vr = .F.
+\n \c vi_max = 1.
+\n \c vs_max = 2.
+\n \c vg_max = 12.
+\n \c vr_max = 12.
+\n \c qi_lim = 1.
+\n \c prog_ccn = .false.
+\n \c do_qa = .true.
+\n \c fast_sat_adj = .true.
+\n \c tau_l2v = 225.
+\n \c tau_v2l = 150.
+\n \c tau_g2v = 900.
+\n \c rthresh = 10.e-6
+\n \c dw_land = 0.16
+\n \c dw_ocean = 0.10
+\n \c ql_gen = 1.0e-3
+\n \c ql_mlt = 1.0e-3
+\n \c qi0_crt = 8.0E-5
+\n \c qs0_crt = 1.0e-3
+\n \c tau_i2s = 1000.
+\n \c c_psaci = 0.05
+\n \c c_pgacs = 0.01
+\n \c rh_inc = 0.30
+\n \c rh_inr = 0.30
+\n \c rh_ins = 0.30
+\n \c ccn_l = 300.
+\n \c ccn_o = 100.
+\n \c c_paut = 0.5
+\n \c c_cracw = 0.8
+\n \c use_ppm = .false.
+\n \c use_ccn = .true.
+\n \c mono_prof = .true.
+\n \c z_slope_liq = .true.
+\n \c z_slope_ice = .true.
+\n \c de_ice = .false.
+\n \c fix_negative = .true.
+\n \c icloud_f = 1
+\n \c mp_time = 150.
+\n \c reiflag = 2
+
-&cires_ugwp_nml
- knob_ugwp_solver = 2
- knob_ugwp_source = 1,1,0,0
- knob_ugwp_wvspec = 1,25,25,25
- knob_ugwp_azdir = 2,4,4,4
- knob_ugwp_stoch = 0,0,0,0
- knob_ugwp_effac = 1,1,1,1
- knob_ugwp_doaxyz = 1
- knob_ugwp_doheat = 1
- knob_ugwp_dokdis = 1
- knob_ugwp_ndx4lh = 1
- knob_ugwp_version = 0
- launch_level = 27
-/
+- \b &cires_ugwp_nml
+\n \c knob_ugwp_solver = 2
+\n \c knob_ugwp_source = 1,1,0,0
+\n \c knob_ugwp_wvspec = 1,25,25,25
+\n \c knob_ugwp_azdir = 2,4,4,4
+\n \c knob_ugwp_stoch = 0,0,0,0
+\n \c knob_ugwp_effac = 1,1,1,1
+\n \c knob_ugwp_doaxyz = 1
+\n \c knob_ugwp_doheat = 1
+\n \c knob_ugwp_dokdis = 1
+\n \c knob_ugwp_ndx4lh = 1
+\n \c knob_ugwp_version = 0
+\n \c launch_level = 27
-/
-\endcode
+\note nstf_name = \f$[2,0,0,0,0]^1 [2,1,0,0,0]^2\f$
+- \f$^1\f$ NSST is on and coupled with spin up off
+- \f$^2\f$ NSST is on and coupled with spin up on
*/
diff --git a/physics/docs/pdftxt/all_shemes_list.txt b/physics/docs/pdftxt/all_shemes_list.txt
index 5c2c8fc13..ef693e3d0 100644
--- a/physics/docs/pdftxt/all_shemes_list.txt
+++ b/physics/docs/pdftxt/all_shemes_list.txt
@@ -44,6 +44,7 @@ parameterizations in suites.
- \b Surface \b Layer \b and \b Simplified \b Ocean \b and \b Sea \b Ice \b Representation
- \subpage GFS_SFCLYR
- \subpage GFS_NSST
+ - \subpage GFS_OCEAN
- \subpage GFS_SFCSICE
- \b Others
diff --git a/physics/docs/pdftxt/mainpage.txt b/physics/docs/pdftxt/mainpage.txt
index 40061277a..69f92e0ba 100644
--- a/physics/docs/pdftxt/mainpage.txt
+++ b/physics/docs/pdftxt/mainpage.txt
@@ -9,13 +9,17 @@ applications for weather through seasonal prediction timescales, encompassing op
developmental schemes under consideration for upcoming
operational implementations. This version contains all parameterizations of the current operational GFS,
plus additional developmental schemes. There are four suites supported for use with the Single Column Model (SCM)
-developed by the Development Testbed Center (GFS_v15p2, GFS_v16beta, GSD_v1, and csawmg), and two suites
-supported for use with the atmospheric component of the UFS (i.e., GFS_v15p2 and GFS_v16beta).
+developed by the Development Testbed Center (GFS_v15p2, GFS_v16beta, GSD_v1, and csawmg), and four suites
+supported for use with the atmospheric component of the UFS (i.e., GFS_v15p2, GFS_v15p2_no_nsst, GFS_v16beta and
+GFS_v16beta_no_nsst). The variants labelled as \a no_nsst are a simplification that uses constant sea surface
+temperature (SST). This simplification is needed when the UFS is initialized with files in GRIdded Binary Edition 2 (GRIB2)
+format instead of files in NOAA Environmental Modeling System (NEMS) Input/Output (NEMSIO) format because the
+fields necessary to predict (SST) are not available in the GRIB2 files.
In this website you will find documentation on various aspects of each
parameterization, including a high-level overview of its function, the input/output argument list,
and a description of the algorithm.
-The latest CCPP public release is Version 4.0 (January 2019), and more details on it may be found on the
+The latest CCPP public release is Version 4.0 (March 2020), and more details on it may be found on the
CCPP website hosted by
the Developmental Testbed Center (DTC).
diff --git a/physics/docs/pdftxt/suite_FV3_GFS_v15p2.xml.txt b/physics/docs/pdftxt/suite_FV3_GFS_v15p2.xml.txt
new file mode 100644
index 000000000..f12b0c366
--- /dev/null
+++ b/physics/docs/pdftxt/suite_FV3_GFS_v15p2.xml.txt
@@ -0,0 +1,101 @@
+/**
+\page suite_FV3_GFS_v15p2_xml suite_FV3_GFS_v15p2.xml
+
+\code
+
+
+
+
+
+
+ fv_sat_adj
+
+
+
+
+ GFS_time_vary_pre
+ GFS_rrtmg_setup
+ GFS_rad_time_vary
+ GFS_phys_time_vary
+
+
+
+
+ GFS_suite_interstitial_rad_reset
+ GFS_rrtmg_pre
+ rrtmg_sw_pre
+ rrtmg_sw
+ rrtmg_sw_post
+ rrtmg_lw_pre
+ rrtmg_lw
+ rrtmg_lw_post
+ GFS_rrtmg_post
+
+
+
+
+ GFS_suite_interstitial_phys_reset
+ GFS_suite_stateout_reset
+ get_prs_fv3
+ GFS_suite_interstitial_1
+ GFS_surface_generic_pre
+ GFS_surface_composites_pre
+ dcyc2t3
+ GFS_surface_composites_inter
+ GFS_suite_interstitial_2
+
+
+
+ sfc_diff
+ GFS_surface_loop_control_part1
+ sfc_nst_pre
+ sfc_nst
+ sfc_nst_post
+ lsm_noah
+ sfc_sice
+ GFS_surface_loop_control_part2
+
+
+
+ GFS_surface_composites_post
+ dcyc2t3_post
+ sfc_diag
+ sfc_diag_post
+ GFS_surface_generic_post
+ GFS_PBL_generic_pre
+ hedmf
+ GFS_PBL_generic_post
+ GFS_GWD_generic_pre
+ cires_ugwp
+ cires_ugwp_post
+ GFS_GWD_generic_post
+ rayleigh_damp
+ GFS_suite_stateout_update
+ ozphys_2015
+ h2ophys
+ GFS_DCNV_generic_pre
+ get_phi_fv3
+ GFS_suite_interstitial_3
+ samfdeepcnv
+ GFS_DCNV_generic_post
+ GFS_SCNV_generic_pre
+ samfshalcnv
+ GFS_SCNV_generic_post
+ GFS_suite_interstitial_4
+ cnvc90
+ GFS_MP_generic_pre
+ gfdl_cloud_microphys
+ GFS_MP_generic_post
+ maximum_hourly_diagnostics
+
+
+
+
+ GFS_stochastics
+
+
+
+
+\endcode
+
+*/
diff --git a/physics/docs/pdftxt/suite_FV3_GFS_v15p2_no_nsst.xml.txt b/physics/docs/pdftxt/suite_FV3_GFS_v15p2_no_nsst.xml.txt
new file mode 100644
index 000000000..cd29eecdb
--- /dev/null
+++ b/physics/docs/pdftxt/suite_FV3_GFS_v15p2_no_nsst.xml.txt
@@ -0,0 +1,100 @@
+/**
+\page suite_FV3_GFS_v15p2_no_nsst_xml suite_FV3_GFS_v15p2_no_nsst.xml
+
+\code
+
+
+
+
+
+
+ fv_sat_adj
+
+
+
+
+ GFS_time_vary_pre
+ GFS_rrtmg_setup
+ GFS_rad_time_vary
+ GFS_phys_time_vary
+
+
+
+
+ GFS_suite_interstitial_rad_reset
+ GFS_rrtmg_pre
+ rrtmg_sw_pre
+ rrtmg_sw
+ rrtmg_sw_post
+ rrtmg_lw_pre
+ rrtmg_lw
+ rrtmg_lw_post
+ GFS_rrtmg_post
+
+
+
+
+ GFS_suite_interstitial_phys_reset
+ GFS_suite_stateout_reset
+ get_prs_fv3
+ GFS_suite_interstitial_1
+ GFS_surface_generic_pre
+ GFS_surface_composites_pre
+ dcyc2t3
+ GFS_surface_composites_inter
+ GFS_suite_interstitial_2
+
+
+
+ sfc_diff
+ GFS_surface_loop_control_part1
+ sfc_ocean
+ lsm_noah
+ sfc_sice
+ GFS_surface_loop_control_part2
+
+
+
+ GFS_surface_composites_post
+ dcyc2t3_post
+ sfc_diag
+ sfc_diag_post
+ GFS_surface_generic_post
+ GFS_PBL_generic_pre
+ hedmf
+ GFS_PBL_generic_post
+ GFS_GWD_generic_pre
+ cires_ugwp
+ cires_ugwp_post
+ GFS_GWD_generic_post
+ rayleigh_damp
+ GFS_suite_stateout_update
+ ozphys_2015
+ h2ophys
+ get_phi_fv3
+ GFS_suite_interstitial_3
+ GFS_DCNV_generic_pre
+ samfdeepcnv
+ GFS_DCNV_generic_post
+ GFS_SCNV_generic_pre
+ samfshalcnv
+ GFS_SCNV_generic_post
+ GFS_suite_interstitial_4
+ cnvc90
+ GFS_MP_generic_pre
+ gfdl_cloud_microphys
+ GFS_MP_generic_post
+ maximum_hourly_diagnostics
+
+
+
+
+ GFS_stochastics
+
+
+
+
+\endcode
+
+*/
+
diff --git a/physics/docs/pdftxt/suite_FV3_GFS_v16beta.xml.txt b/physics/docs/pdftxt/suite_FV3_GFS_v16beta.xml.txt
new file mode 100644
index 000000000..722224988
--- /dev/null
+++ b/physics/docs/pdftxt/suite_FV3_GFS_v16beta.xml.txt
@@ -0,0 +1,101 @@
+/**
+\page suite_FV3_GFS_v16beta_xml suite_FV3_GFS_v16beta.xml
+
+\code
+
+
+
+
+
+
+ fv_sat_adj
+
+
+
+
+ GFS_time_vary_pre
+ GFS_rrtmg_setup
+ GFS_rad_time_vary
+ GFS_phys_time_vary
+
+
+
+
+ GFS_suite_interstitial_rad_reset
+ GFS_rrtmg_pre
+ rrtmg_sw_pre
+ rrtmg_sw
+ rrtmg_sw_post
+ rrtmg_lw_pre
+ rrtmg_lw
+ rrtmg_lw_post
+ GFS_rrtmg_post
+
+
+
+
+ GFS_suite_interstitial_phys_reset
+ GFS_suite_stateout_reset
+ get_prs_fv3
+ GFS_suite_interstitial_1
+ GFS_surface_generic_pre
+ GFS_surface_composites_pre
+ dcyc2t3
+ GFS_surface_composites_inter
+ GFS_suite_interstitial_2
+
+
+
+ sfc_diff
+ GFS_surface_loop_control_part1
+ sfc_nst_pre
+ sfc_nst
+ sfc_nst_post
+ lsm_noah
+ sfc_sice
+ GFS_surface_loop_control_part2
+
+
+
+ GFS_surface_composites_post
+ dcyc2t3_post
+ sfc_diag
+ sfc_diag_post
+ GFS_surface_generic_post
+ GFS_PBL_generic_pre
+ satmedmfvdifq
+ GFS_PBL_generic_post
+ GFS_GWD_generic_pre
+ cires_ugwp
+ cires_ugwp_post
+ GFS_GWD_generic_post
+ rayleigh_damp
+ GFS_suite_stateout_update
+ ozphys_2015
+ h2ophys
+ GFS_DCNV_generic_pre
+ get_phi_fv3
+ GFS_suite_interstitial_3
+ samfdeepcnv
+ GFS_DCNV_generic_post
+ GFS_SCNV_generic_pre
+ samfshalcnv
+ GFS_SCNV_generic_post
+ GFS_suite_interstitial_4
+ cnvc90
+ GFS_MP_generic_pre
+ gfdl_cloud_microphys
+ GFS_MP_generic_post
+ maximum_hourly_diagnostics
+
+
+
+
+ GFS_stochastics
+
+
+
+
+\endcode
+
+*/
diff --git a/physics/docs/pdftxt/suite_FV3_GFS_v16beta_no_nsst.xml.txt b/physics/docs/pdftxt/suite_FV3_GFS_v16beta_no_nsst.xml.txt
new file mode 100644
index 000000000..adeb4352a
--- /dev/null
+++ b/physics/docs/pdftxt/suite_FV3_GFS_v16beta_no_nsst.xml.txt
@@ -0,0 +1,98 @@
+/**
+\page suite_FV3_GFS_v16beta_no_nsst_xml suite_FV3_GFS_v16beta_no_nsst.xml
+
+\code
+
+
+
+
+
+
+ fv_sat_adj
+
+
+
+
+ GFS_time_vary_pre
+ GFS_rrtmg_setup
+ GFS_rad_time_vary
+ GFS_phys_time_vary
+
+
+
+
+ GFS_suite_interstitial_rad_reset
+ GFS_rrtmg_pre
+ rrtmg_sw_pre
+ rrtmg_sw
+ rrtmg_sw_post
+ rrtmg_lw_pre
+ rrtmg_lw
+ rrtmg_lw_post
+ GFS_rrtmg_post
+
+
+
+
+ GFS_suite_interstitial_phys_reset
+ GFS_suite_stateout_reset
+ get_prs_fv3
+ GFS_suite_interstitial_1
+ GFS_surface_generic_pre
+ GFS_surface_composites_pre
+ dcyc2t3
+ GFS_surface_composites_inter
+ GFS_suite_interstitial_2
+
+
+
+ sfc_diff
+ GFS_surface_loop_control_part1
+ sfc_ocean
+ lsm_noah
+ sfc_sice
+ GFS_surface_loop_control_part2
+
+
+
+ GFS_surface_composites_post
+ dcyc2t3_post
+ sfc_diag
+ sfc_diag_post
+ GFS_surface_generic_post
+ GFS_PBL_generic_pre
+ satmedmfvdifq
+ GFS_PBL_generic_post
+ GFS_GWD_generic_pre
+ cires_ugwp
+ cires_ugwp_post
+ GFS_GWD_generic_post
+ rayleigh_damp
+ GFS_suite_stateout_update
+ ozphys_2015
+ h2ophys
+ get_phi_fv3
+ GFS_suite_interstitial_3
+ GFS_DCNV_generic_pre
+ samfdeepcnv
+ GFS_DCNV_generic_post
+ GFS_SCNV_generic_pre
+ samfshalcnv
+ GFS_SCNV_generic_post
+ GFS_suite_interstitial_4
+ cnvc90
+ GFS_MP_generic_pre
+ gfdl_cloud_microphys
+ GFS_MP_generic_post
+ maximum_hourly_diagnostics
+
+
+
+
+ GFS_stochastics
+
+
+
+
+\endcode
+*/
diff --git a/physics/docs/pdftxt/suite_input.nml.txt b/physics/docs/pdftxt/suite_input.nml.txt
index c98c83eef..6785fcbb2 100644
--- a/physics/docs/pdftxt/suite_input.nml.txt
+++ b/physics/docs/pdftxt/suite_input.nml.txt
@@ -244,14 +244,14 @@ and how stochastic perturbations are used in the Noah Land Surface Model.
| debug | gfs_control_type | flag for debug printout | .false.
|
| nstf_name(5) | gfs_control_type | NSST related paramters:\n
- - nstf_name(1): 0=NSSTM off, 1= NSSTM on but uncoupled, 2= NSSTM on and coupled
-
- nstf_name(2): 1=NSSTM spin up on, 0=NSSTM spin up off
-
- nstf_name(3): 1=NSST analysis on, 0=NSSTM analysis off
+
- nstf_name(1): 0=NSST off, 1= NSST on but uncoupled, 2= NSST on and coupled
+
- nstf_name(2): 1=NSST spin up on, 0=NSST spin up off
+
- nstf_name(3): 1=NSST analysis on, 0=NSST analysis off
- nstf_name(4): zsea1 in mm
- nstf_name(5): zesa2 in mm
| /0,0,1,0,5/
- |
| nst_anl | gfs_control_type | flag for NSSTM analysis in gcycle/sfcsub | .false.
+ |
| nst_anl | gfs_control_type | flag for NSST analysis in gcycle/sfcsub | .false.
|
| effr_in | gfs_control_type | logical flag for using input cloud effective radii calculation | .false.
|
| aero_in | gfs_control_type | logical flag for using aerosols in Morrison-Gettelman microphysics | .false.
|
| iau_delthrs | gfs_control_type | incremental analysis update (IAU) time interval in hours | 6
@@ -419,42 +419,61 @@ and how stochastic perturbations are used in the Noah Land Surface Model.
|
| skebint | compns_stochy_mod | | 0
|
| \b &gfdl_cloud_microphysics_nml
|
| sedi_transport | gfdl_cloud_microphys_mod | logical flag for turning on horizontal momentum transport during sedimentation | .true.
+ |
| do_sedi_w | gfdl_cloud_microphys_mod | \a .true. to turn on vertical motion transport during sedimentation. (not supported in GFS physics) | .false.
|
| do_sedi_heat | gfdl_cloud_microphys_mod | logical flag for turning on horizontal heat transport during sedimentation | .true.
|
| rad_snow | gfdl_cloud_microphys_mod | logical flag for considering snow in cloud fraction calculation | .true.
|
| rad_graupel | gfdl_cloud_microphys_mod | logical flag for considering graupel in cloud fraction calculation | .true.
|
| rad_rain | gfdl_cloud_microphys_mod | logical flag for considering rain in cloud fraction calculation | .true.
+ |
| cld_min | gfdl_cloud_microphys_mod | minimum cloud fraction. If total cloud condensate exceeds 1.0e-6 kg/kg, cloud fraction cannot be less than \p cld_min | 0.05
|
| const_vi | gfdl_cloud_microphys_mod | logical flag for using constant cloud ice fall speed | .false.
|
| const_vs | gfdl_cloud_microphys_mod | logical flag for using constant snow fall speed | .false.
|
| const_vg | gfdl_cloud_microphys_mod | logical flag for using constant graupel fall speed | .false.
|
| const_vr | gfdl_cloud_microphys_mod | logical flag for using constant rain fall speed | .false.
+ |
| vi_fac | gfdl_cloud_microphys_mod | tunable factor for cloud ice fall or the constant cloud ice fall speed when \p const_vi is .true. | 1.
+ |
| vr_fac | gfdl_cloud_microphys_mod | tunable factor for rain fall or the constant rain fall speed when \p const_vr is .true. | 1.
+ |
| vs_fac | gfdl_cloud_microphys_mod | tunable factor for snow fall or the constant snow fall speed when \p const_vs is .true. | 1.
+ |
| vg_fac | gfdl_cloud_microphys_mod | tunable factor for graupel fall or the constant graupel fall speed when \p const_vg is .true. | 1.
|
| vi_max | gfdl_cloud_microphys_mod | maximum fall speed for cloud ice | 0.5
|
| vs_max | gfdl_cloud_microphys_mod | maximum fall speed for snow | 5.0
|
| vg_max | gfdl_cloud_microphys_mod | maximum fall speed for graupel | 8.0
|
| vr_max | gfdl_cloud_microphys_mod | maximum fall speed for rain | 12.0
|
| qi_lim | gfdl_cloud_microphys_mod | cloud ice limiter to prevent large ice built up in cloud ice freezing and deposition | 1.
|
| prog_ccn | gfdl_cloud_microphys_mod | logical flag for activating prognostic CCN (not supported in GFS Physics) | .false.
- |
| do_qa | gfdl_cloud_microphys_mod | logical flag for activating inline cloud fraction diagnosis in fast saturation adjustment | .true.
- |
| fast_sat_adj | gfdl_cloud_microphys_mod | logical flag for adjusting cloud water evaporation/freezing, cloud ice deposition when fast saturation adjustment is activated | .true.
+ |
| do_qa | gfdl_cloud_microphys_mod | \a .true. to activate inline cloud fraction diagnosis in fast saturation adjustment. \a .false. to activate inline cloud fraction diagnosis in major cloud microphysics | .true.
+ |
| fast_sat_adj | gfdl_cloud_microphys_mod | logical flag for adjusting cloud water evaporation (cloud water -> water vapor), cloud water freezing (cloud water -> cloud ice), cloud ice deposition (water vapor -> cloud ice) when fast saturation adjustment is activated (\b do_sat_adj = .true. in \b fv_core_nml block) | .true.
|
| tau_l2v | gfdl_cloud_microphys_mod | time scale for evaporation of cloud water to water vapor. Increasing(decreasing) \p tau_l2v can decrease(boost) deposition of cloud water to water vapor | 300.
|
| tau_v2l | gfdl_cloud_microphys_mod | time scale for condensation of water vapor to cloud water. Increasing(decreasing) \p tau_v2l can decrease(boost) condensation of water vapor to cloud water | 150.
|
| tau_g2v | gfdl_cloud_microphys_mod | time scale for sublimation of graupel to water vapor. Increasing(decreasing) \p tau_g2v can decrease(boost) sublimation of graupel to water vapor | 900.
+ |
| tau_g2r | gfdl_cloud_microphys_mod | time scale for graupel melting. Increasing(decreasing) \p tau_g2r can decrease(boost) melting of graupel to rain (graupel-> rain) | 600.
+ |
| tau_v2g | gfdl_cloud_microphys_mod | time scale for deposition of water vapor to graupel. Increasing(decreasing) \p tau_v2g can decrease(boost) deposition of water vapor to graupel (water vapor -> graupel) | 21600.
+ |
| tau_l2r | gfdl_cloud_microphys_mod | time scale for autoconversion of cloud water to rain. Increasing(decreasing) \p tau_l2r can decrese(boost) autoconversion of cloud water to rain (cloud water -> rain) | 900.
+ |
| tau_r2g | gfdl_cloud_microphys_mod | time scale for freezing of rain to graupel. Increasing(decreasing) \p tau_r2g can decrease(boost) freezing of rain to graupel (rain->graupel) | 900.
+ |
| tau_i2s | gfdl_cloud_microphys_mod | time scale for autoconversion of cloud ice to snow. Increasing(decreasing) \p tau_i2s can decrease(boost) autoconversion of cloud ice to snow (cloud ice -> snow) | 1000.
+ |
| tau_imlt | gfdl_cloud_microphys_mod | time scale for cloud ice melting. Increasing(decreasing) \p tau_imlt can decrease(boost) melting of cloud ice to cloud water or rain (cloud ice -> cloud water or rain) | 600.
+ |
| tau_smlt | gfdl_cloud_microphys_mod | time scale for snow melting. Increasing(decreasing) \p tau_smlt can decrease(boost) melting of snow to cloud water or rain (snow-> cloud water or rain) | 900.
|
| rthresh | gfdl_cloud_microphys_mod | critical cloud water radius for autoconversion (cloud water -> rain). Increasing(decreasing) of \p rthresh makes the autoconversion harder(easier) | 10.0e-6
|
| dw_land | gfdl_cloud_microphys_mod | base value for subgrid deviation/variability over land | 0.20
|
| dw_ocean | gfdl_cloud_microphys_mod | base value for subgrid deviation/variability over ocean | 0.10
|
| ql_gen | gfdl_cloud_microphys_mod | maximum value for cloud water generated from condensation of water vapor (water vapor-> cloud water) | 1.0e-3
- |
| ql_mlt | gfdl_cloud_microphys_mod | maximum value of cloud water allowed from melted cloud ice (cloud ice -> cloud water or rain) | 2.0e-3
- |
| qi0_crt | gfdl_cloud_microphys_mod | threshold of cloud ice to snow autoconversion (cloud ice -> snow) | 1.0e-4
- |
| qs0_crt | gfdl_cloud_microphys_mod | threshold of snow to graupel autoconversion (snow -> graupel) | 1.0e-3
- |
| tau_i2s | gfdl_cloud_microphys_mod | time scale for autoconversion of cloud ice to snow | 1000.
- |
| c_psaci | gfdl_cloud_microphys_mod | accretion efficiency of cloud ice to snow | 0.02
- |
| c_pgacs | gfdl_cloud_microphys_mod | accretion efficiency of snow to graupel | 2.0e-3
+ |
| qi_gen | gfdl_cloud_microphys_mod | maximum value of cloud ice generated from deposition of water vapor (water vapor->cloud ice) or freezing(cloud water -> cloud ice). Increasing(decreasing) \p qi_gen can increas(decrease) cloud ice | 1.82e-6
+ |
| ql_mlt | gfdl_cloud_microphys_mod | maximum value of cloud water allowed from melted cloud ice (cloud ice -> cloud water or rain). Exceedance of which will become rain. Increasing(decreasing) \p ql_mlt can increase(decrease) cloud water and decrease(increase) rain | 2.0e-3
+ |
| qs_mlt | gfdl_cloud_microphys_mod | maximum value of cloud water allowed from melted snow (snow -> cloud water or rain). Exceedance of which will become rain. Increasing(decreasing) \p qs_mlt can increas(decrease) cloud water and decrease (increase) rain | 1.0e-6
+ |
| ql0_max | gfdl_cloud_microphys_mod | threshold of cloud water to rain autoconversion (cloud water -> rain). Increasing(decreasing) \p ql0_max can increase(decrease) rain and decrease(increase) cloud water | 2.0e-3
+ |
| qi0_max | gfdl_cloud_microphys_mod | maximum value of cloud ice generated from other sources like convection. Exceedance of which will become snow. Increasing(decreasing) \p qi0_max can increase(decrease) cloud ice and decrease(increase) snow | 1.0e-4
+ |
| qi0_crt | gfdl_cloud_microphys_mod | threshold of cloud ice to snow autoconversion (cloud ice -> snow). Increasing(decreasing) \p qi0_crt can increase(decrease) cloud ice and decrease(increase) snow | 1.0e-4
+ |
| qs0_crt | gfdl_cloud_microphys_mod | threshold of snow to graupel autoconversion (snow -> graupel). Increasing(decreasing) \p qs0_crt can increase(decrease) snow and decrease(increase) graupel | 1.0e-3
+ |
| qc_crt | gfdl_cloud_microphys_mod | minimum value of cloud condensate to allow partial cloudiness. Partial cloud can only exist when total cloud condensate exceeds \p qc_crt | 5.0e-8
+ |
| c_psaci | gfdl_cloud_microphys_mod | accretion efficiency of cloud ice to snow (cloud ice -> snow). Increasing(decreasing) of \p c_psaci can boost(decrease) the accretion of cloud ice to snow | 0.02
+ |
| c_pgacs | gfdl_cloud_microphys_mod | accretion efficiency of snow to graupel (snow -> graupel). Increasing(decreasing) of \p c_pgacs can boost(decrease) the accretion of snow to graupel | 2.0e-3
|
| rh_inc | gfdl_cloud_microphys_mod | relative humidity increment for complete evaporation of cloud water and cloud ice | 0.25
|
| rh_inr | gfdl_cloud_microphys_mod | relative humidity increment for sublimation of snow | 0.25
|
| rh_ins | gfdl_cloud_microphys_mod | relative humidity increment for minimum evaporation of rain | 0.25
- |
| ccn_l | gfdl_cloud_microphys_mod | base CCN over land \f$cm^{-3}\f$ | 270.
- |
| ccn_o | gfdl_cloud_microphys_mod | base CCN over ocean \f$cm^{-3}\f$ | 90.
- |
| c_paut | gfdl_cloud_microphys_mod | autoconversion efficiency of cloud water to rain | 0.55
- |
| c_cracw | gfdl_cloud_microphys_mod | accretion efficiency of cloud water to rain | 0.9
+ |
| rthresh | gfdl_cloud_microphys_mod | critical cloud water radius for autoconversion(cloud water->rain). Increasing(decreasing) of \p rthresh makes the autoconversion harder(easier) | 1.0e-5
+ |
| ccn_l | gfdl_cloud_microphys_mod | base CCN over land. Increasing(decreasing) \p ccn_l can on the one hand boost(decrease) the autoconversion of cloud water to rain, on the other hand make the autoconversion harder(easier). The unit is \f$cm^{-3}\f$ | 270.
+ |
| ccn_o | gfdl_cloud_microphys_mod | base CCN over ocean. Increasing(decreasing) \p ccn_o can on the one hand boost(decrease) the autoconversion of cloud water to rain, on the other hand make the autoconversion harder(easier). The unit is \f$cm^{-3}\f$ | 90.
+ |
| c_paut | gfdl_cloud_microphys_mod | autoconversion efficiency of cloud water to rain (cloud water -> rain). Increasing(decreasing) of \p c_paut can boost(decrease) the autoconversion of cloud water to rain | 0.55
+ |
| c_cracw | gfdl_cloud_microphys_mod | accretion efficiency of cloud water to rain (cloud water -> rain). Increasing(decreasing) of \p c_cracw can boost(decrease) the accretion of cloud water to rain | 0.9
+ |
| sat_adj0 | gfdl_cloud_microphys_mod | adjust factor for condensation of water vapor to cloud water (water vapor->cloud water) and deposition of water vapor to cloud ice | 0.9
|
| use_ppm | gfdl_cloud_microphys_mod | \e true to use PPM fall scheme; \e false to use time-implicit monotonic fall scheme | .false.
|
| use_ccn | gfdl_cloud_microphys_mod | \e true to compute prescribed CCN. It should be .true. when \p prog_ccn = .false. | .false.
|
| mono_prof | gfdl_cloud_microphys_mod | \e true to turn on terminal fall with monotonic PPM scheme. This is used together with \p use_ppm=.true. | .true.
@@ -463,7 +482,13 @@ and how stochastic perturbations are used in the Noah Land Surface Model.
|
| de_ice | gfdl_cloud_microphys_mod | \e true to convert excessive cloud ice to snow to prevent ice over-built from other sources like convection scheme (not supported in GFS physics) | .false.
|
| fix_negative | gfdl_cloud_microphys_mod | \e true to fix negative water species using nearby points | .false.
|
| icloud_f | gfdl_cloud_microphys_mod | flag (0,1,or 2) for cloud fraction diagnostic scheme | 0
- |
| mp_time | gfdl_cloud_microphys_mod | time step of GFDL cloud microphysics | 150.
+ |
| irain_f | gfdl_cloud_microphys_mod | flag (0 or 1) for cloud water autoconversion to rain scheme. 0: with subgrid variability; 1: no subgrid variability | 0
+ |
| mp_time | gfdl_cloud_microphys_mod | time step of GFDL cloud microphysics (MP). If \p mp_time isn't divisible by physics time step or is larger than physics time step, the actual MP time step becomes \p dt/NINT[dt/MIN(dt,mp_time)] | 150.
+ |
| alin | gfdl_cloud_microphys_mod | parameter \a a in Lin et al.(1983). Constant in empirical formula for \f$U_R\f$. Increasing(decreasing) \p alin can boost(decrease) accretion of cloud water by rain and rain evaporation 842.
+| clin | gfdl_cloud_microphys_mod | parameter \a c in Lin et al.(1983). Constant in empirical formula for \f$U_S\f$. Increasing(decreasing) \p clin can boost(decrease) accretion of cloud water by snow, accretion of cloud ice by snow, snow sublimation and deposition, and snow melting | 4.8
+ | | t_min | gfdl_cloud_microphys_mod | temperature threshold for instant deposition. Deposit all water vapor to cloud ice when temperature is lower than \p t_min | 178.
+ | | t_sub | gfdl_cloud_microphys_mod | temperature threshold for sublimation. Cloud ice, snow or graupel stops(starts) sublimation when temperature is lower(higher) then \p t_sub | 184.
+ | | mp_print | gfdl_cloud_microphys_mod | \a .true. to turn on GFDL cloud microphysics debugging print out. (not supported in GFS physics) | .false.
| | \b &cires_ugwp_nml
| | knob_ugwp_version | cires_ugwp_module | parameter selects a version of the UGWP implementation in FV3GFS-127L \n
diff --git a/physics/sfc_nst.f b/physics/sfc_nst.f
index ed43a719d..06a8a9c4c 100644
--- a/physics/sfc_nst.f
+++ b/physics/sfc_nst.f
@@ -29,19 +29,16 @@ end subroutine sfc_nst_finalize
!! \section NSST_general_algorithm GFS Near-Surface Sea Temperature Scheme General Algorithm
!> @{
subroutine sfc_nst_run &
-! --- inputs:
- & ( im, hvap, cp, hfus, jcal, eps, epsm1, rvrdm1, rd, rhw0, &
+ & ( im, hvap, cp, hfus, jcal, eps, epsm1, rvrdm1, rd, rhw0, & ! --- inputs:
& pi, sbc, ps, u1, v1, t1, q1, tref, cm, ch, &
& prsl1, prslki, prsik1, prslk1, wet, xlon, sinlat, &
& stress, &
& sfcemis, dlwflx, sfcnsw, rain, timestep, kdt, solhr,xcosz, &
& wind, flag_iter, flag_guess, nstf_name1, nstf_name4, &
& nstf_name5, lprnt, ipr, &
-! --- input/output:
- & tskin, tsurf, xt, xs, xu, xv, xz, zm, xtts, xzts, dt_cool, &
+ & tskin, tsurf, xt, xs, xu, xv, xz, zm, xtts, xzts, dt_cool, & ! --- input/output:
& z_c, c_0, c_d, w_0, w_d, d_conv, ifd, qrain, &
-! --- outputs:
- & qsurf, gflux, cmm, chh, evap, hflx, ep, errmsg, errflg &
+ & qsurf, gflux, cmm, chh, evap, hflx, ep, errmsg, errflg & ! --- outputs:
& )
!
! ===================================================================== !
diff --git a/physics/sfc_ocean.F b/physics/sfc_ocean.F
index 9635f30b8..e21ddb3a7 100644
--- a/physics/sfc_ocean.F
+++ b/physics/sfc_ocean.F
@@ -1,3 +1,9 @@
+!>\file sfc_ocean.F
+!! This file contains an alternative GFS near-surface sea temperature
+!! scheme when the model is initialized from GRIB2 data.
+
+!> This module contains the CCPP-compliant GFS near-surface sea temperature
+!! scheme when the model is initialized from GRIB2 data.
module sfc_ocean
implicit none
private
@@ -15,19 +21,17 @@ end subroutine sfc_ocean_init
subroutine sfc_ocean_finalize()
end subroutine sfc_ocean_finalize
-#if 0
+!>\defgroup gfs_ocean_main GFS Simple Ocean Scheme Module
+!! This subroutine calculates thermodynamical properties over
+!! open water.
!! \section arg_table_sfc_ocean_run Argument Table
!! \htmlinclude sfc_ocean_run.html
!!
-#endif
subroutine sfc_ocean_run &
-!...................................
-! --- inputs:
- & ( im, cp, rd, eps, epsm1, hvap, rvrdm1, ps, t1, q1, &
+ & ( im, cp, rd, eps, epsm1, hvap, rvrdm1, ps, t1, q1, & ! --- inputs
& tskin, cm, ch, prsl1, prslki, wet, wind, &
& flag_iter, &
-! --- outputs:
- & qsurf, cmm, chh, gflux, evap, hflx, ep, &
+ & qsurf, cmm, chh, gflux, evap, hflx, ep, & ! --- outputs
& errmsg, errflg &
& )
| |