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Update gh-ci.yaml

Update gh-ci.yaml #87

Workflow file for this run

name: CI
on:
push:
branches:
- main
pull_request:
schedule:
# once a week at midnight on Sunday
- cron: "0 0 * * 0"
workflow_dispatch:
concurrency:
group: "${{ github.workflow }}-${{ github.ref }}"
cancel-in-progress: true
jobs:
run-tests:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ubuntu-latest, macOS-latest, windows-latest]
steps:
- uses: actions/checkout@v3
- uses: actions/setup-python@v4
with:
python-version: "3.11"
- name: default
id: default-matrix
uses: ./
- name: exclude latest
id: exclude-latest
uses: ./
with:
exclude: '["3.13"]'
- name: exclude 2 include 1
id: exclude-2-include-1
uses: ./
with:
exclude: '["3.11", "3.9"]'
include: '["3.14"]'
- name: release 2.4.3
id: release-243
uses: ./
with:
release: "2.4.3"
- name: mda_latest
id: mda-latest
uses: ./
with:
release: "latest"
- name: check outputs
shell: bash
run: |
echo "test 1"
python utils/assert_varray.py --input ${{ toJSON(steps.default-matrix.outputs.python-versions) }} --target '["3.10", "3.11", "3.12", "3.13"]'
[[ "${{ steps.default-matrix.outputs.latest-python }}" == "3.13" ]] || exit 1
[[ "${{ steps.default-matrix.outputs.stable-python }}" == "3.12" ]] || exit 1
[[ "${{ steps.default-matrix.outputs.oldest-python }}" == "3.10" ]] || exit 1
echo "test 2"
python utils/assert_varray.py --input ${{ toJSON(steps.exclude-latest.outputs.python-versions) }} --target '["3.10", "3.11", "3.12"]'
[[ "${{ steps.exclude-latest.outputs.latest-python }}" == "3.12" ]] || exit 1
[[ "${{ steps.exclude-latest.outputs.stable-python }}" == "3.11" ]] || exit 1
[[ "${{ steps.exclude-latest.outputs.oldest-python }}" == "3.10" ]] || exit 1
echo "test 3"
python utils/assert_varray.py --input ${{ toJSON(steps.exclude-2-include-1.outputs.python-versions) }} --target '["3.10", "3.12", "3.13", "3.14"]'
[[ "${{ steps.exclude-2-include-1.outputs.latest-python }}" == "3.14" ]] || exit 1
[[ "${{ steps.exclude-2-include-1.outputs.stable-python }}" == "3.13" ]] || exit 1
[[ "${{ steps.exclude-2-include-1.outputs.oldest-python }}" == "3.10" ]] || exit 1
echo "test 4"
python utils/assert_varray.py --input ${{ toJSON(steps.release-243.outputs.python-versions) }} --target '["3.8", "3.9", "3.10", "3.11"]'
[[ "${{ steps.release-243.outputs.latest-python }}" == "3.11" ]] || exit 1
[[ "${{ steps.release-243.outputs.stable-python }}" == "3.10" ]] || exit 1
[[ "${{ steps.release-243.outputs.oldest-python }}" == "3.8" ]] || exit 1
echo "test 5"
python utils/assert_varray.py --input ${{ toJSON(steps.mda-latest.outputs.python-versions) }} --target '["3.9", "3.10", "3.11", "3.12"]'
python-config:
runs-on: ubuntu-latest
outputs:
python-matrix: ${{ steps.get-compatible-python.outputs.python-versions }}
stable-python: ${{ steps.get-compatible-python.outputs.stable-python }}
latest-python: ${{ steps.get-compatible-python.outputs.latest-python }}
oldest-python: ${{ steps.get-compatible-python.outputs.oldest-python }}
steps:
- uses: actions/setup-python@v4
with:
python-version: "3.11"
- name: get compatible python
id: get-compatible-python
uses: MDAnalysis/mdanalysis-compatible-python@main
matrix-test:
needs: python-config
runs-on: ubuntu-22.04
strategy:
matrix:
python: ${{ fromJSON(needs.python-config.outputs.python-matrix) }}
steps:
- uses: actions/setup-python@v4
with:
python-version: ${{matrix.python}}