Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Can't Download all the packages required for VicTree using environment.yml file #56

Open
kctsai03 opened this issue Oct 21, 2024 · 1 comment

Comments

@kctsai03
Copy link

Good evening, I'm an undergrad at Princeton University and trying to run the simulations that you used in your paper. I've cloned the repo and am trying to create a new conda environment using the environment.yml file. In the directory with the yml file, I ran the command "conda env create -f environment.yml", but I get the following error:
Solving environment: failed

ResolvePackageNotFound:
for the following packages.

ResolvePackageNotFound:

  • glib==2.69.1=he621ea3_2
  • libiconv==1.16=h7f8727e_2
  • poppler==22.12.0=h9614445_3
  • libgcc-ng==11.2.0=h1234567_1
  • numpy==1.25.2=py310h5f9d8c6_0
  • sqlite==3.41.2=h5eee18b_0
  • matplotlib-base==3.7.2=py310h1128e8f_0
  • libgomp==11.2.0=h1234567_1
  • ninja-base==1.10.2=hd09550d_5
  • sip==6.6.2=py310h6a678d5_0
  • expat==2.5.0=h6a678d5_0
  • mpfr==4.0.2=hb69a4c5_1
  • wheel==0.41.2=py310h06a4308_0
  • c-ares==1.19.1=h5eee18b_0
  • _openmp_mutex==5.1=1_gnu
  • libgd==2.3.3=h695aa2c_1
  • openssl==3.0.11=h7f8727e_2
  • mpmath==1.3.0=py310h06a4308_0
  • libcurl==8.4.0=h251f7ec_0
  • libprotobuf==3.20.3=he621ea3_0
  • libuuid==1.41.5=h5eee18b_0
  • dbus==1.13.18=hb2f20db_0
  • pip==23.3=py310h06a4308_0
  • jpeg==9e=h5eee18b_1
  • python==3.10.13=h955ad1f_0
  • mysql==5.7.24=h721c034_2
  • gmp==6.2.1=h295c915_3
  • libclang13==14.0.6=default_he11475f_1
  • harfbuzz==4.3.0=hf52aaf7_1
  • gobject-introspection==1.72.0=py310hbb6d50b_2
  • libbrotlienc==1.0.9=h5eee18b_7
  • gts==0.7.6=hb67d8dd_3
  • freetype==2.12.1=h4a9f257_0
  • xz==5.4.2=h5eee18b_0
  • ca-certificates==2023.08.22=h06a4308_0
  • mkl==2023.1.0=h213fc3f_46343
  • bzip2==1.0.8=h7b6447c_0
  • librsvg==2.54.4=h36cc946_3
  • libwebp==1.3.2=h11a3e52_0
  • intel-openmp==2023.1.0=hdb19cb5_46305
  • libssh2==1.10.0=hdbd6064_2
  • pixman==0.40.0=h7f8727e_1
  • qt-main==5.15.2=h7358343_9
  • libcups==2.4.2=h2d74bed_1
  • cyrus-sasl==2.1.28=h52b45da_1
  • ld_impl_linux-64==2.38=h1181459_1
  • mpc==1.1.0=h10f8cd9_1
  • libev==4.33=h7f8727e_1
  • setuptools==68.0.0=py310h06a4308_0
  • libclang==14.0.6=default_hc6dbbc7_1
  • lz4-c==1.9.4=h6a678d5_0
  • libdeflate==1.17=h5eee18b_1
  • libevent==2.1.12=hdbd6064_1
  • mkl_fft==1.3.8=py310h5eee18b_0
  • libbrotlicommon==1.0.9=h5eee18b_7
  • mkl-service==2.4.0=py310h5eee18b_1
  • cairo==1.16.0=hb05425b_5
  • graphviz==2.50.0=h1b29801_1
  • pygraphviz==1.9=py310h5eee18b_1
  • libbrotlidec==1.0.9=h5eee18b_7
  • giflib==5.2.1=h5eee18b_3
  • tk==8.6.12=h1ccaba5_0
  • lerc==3.0=h295c915_0
  • gtk2==2.24.33=h73c1081_2
  • lcms2==2.12=h3be6417_0
  • openjpeg==2.4.0=h3ad879b_0
  • jinja2==3.1.2=py310h06a4308_0
  • pcre==8.45=h295c915_0
  • gstreamer==1.14.1=h5eee18b_1
  • gdk-pixbuf==2.42.10=h5eee18b_0
  • libedit==3.1.20221030=h5eee18b_0
  • libpq==12.15=hdbd6064_1
  • qt-webengine==5.15.9=h9ab4d14_7
  • gst-plugins-base==1.14.1=h6a678d5_1
  • brotli==1.0.9=h5eee18b_7
  • networkx==3.1=py310h06a4308_0
  • fontconfig==2.14.1=h4c34cd2_2
  • libtiff==4.5.1=h6a678d5_0
  • libboost==1.73.0=h28710b8_12
  • libxcb==1.15=h7f8727e_0
  • ply==3.11=py310h06a4308_0
  • poppler-data==0.4.11=h06a4308_1
  • libxkbcommon==1.0.1=h5eee18b_1
  • libxslt==1.1.37=h2085143_0
  • zstd==1.5.5=hc292b87_0
  • libwebp-base==1.3.2=h5eee18b_0
  • icu==58.2=he6710b0_3
  • pyqt==5.15.7=py310h6a678d5_1
  • libpng==1.6.39=h5eee18b_0
  • atk-1.0==2.36.0=ha1a6a79_0
  • krb5==1.20.1=h143b758_1
  • libtool==2.4.6=h6a678d5_1009
  • pytorch==2.0.1=cpu_py310hdc00b08_0
  • nss==3.89.1=h6a678d5_0
  • mkl_random==1.2.4=py310hdb19cb5_0
  • libnghttp2==1.57.0=h2d74bed_0
  • zlib==1.2.13=h5eee18b_0
  • brotli-bin==1.0.9=h5eee18b_7
  • readline==8.2=h5eee18b_0
  • typing-extensions==4.7.1=py310h06a4308_0
  • filelock==3.9.0=py310h06a4308_0
  • gmpy2==2.1.2=py310heeb90bb_0
  • graphite2==1.3.14=h295c915_1
  • pango==1.50.7=h05da053_0
  • sympy==1.11.1=py310h06a4308_0
  • ninja==1.10.2=h06a4308_5
  • tornado==6.3.3=py310h5eee18b_0
  • cffi==1.15.1=py310h5eee18b_3
  • markupsafe==2.1.1=py310h7f8727e_0
  • numpy-base==1.25.2=py310hb5e798b_0
  • fribidi==1.0.10=h7b6447c_0
  • libllvm14==14.0.6=hdb19cb5_3
  • libffi==3.4.4=h6a678d5_0
  • ncurses==6.4=h6a678d5_0
  • nspr==4.35=h6a678d5_0
  • typing_extensions==4.7.1=py310h06a4308_0
  • boost-cpp==1.73.0=h7f8727e_12
  • libxml2==2.10.4=hcbfbd50_0
  • qtwebkit==5.212=h3fafdc1_5
  • libstdcxx-ng==11.2.0=h1234567_1

When using conda search, the build version is no longer there for these packages. Do you have any idea on how I can resolve these issues and successfully install VIcTree onto my computer so that I can run it?

@schmidt73
Copy link

Bump on this, I am also interested in running the software.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants