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CondaEnvironment.yml
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CondaEnvironment.yml
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name: GraphAligner
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- asn1crypto=0.24.0=py36_0
- bcrypt=3.1.4=py36h14c3975_0
- binutils=2.31=0
- binutils_impl_linux-64=2.28.1=had2808c_3
- binutils_linux-64=7.2.0=had2808c_27
- blas=1.0=mkl
- boost=1.67.0=py36_4
- bzip2=1.0.6=h14c3975_5
- ca-certificates=2019.9.11=hecc5488_0
- certifi=2019.9.11=py36_0
- cffi=1.11.5=py36h9745a5d_0
- chardet=3.0.4=py36_1
- cloog=0.18.0=0
- cryptography=2.2.2=py36h14c3975_0
- docutils=0.14=py36_0
- dropbox=8.9.0=py36_0
- filechunkio=1.6=py36_0
- ftputil=3.2=py36_0
- gcc_impl_linux-64=7.2.0=habb00fd_3
- gcc_linux-64=7.2.0=h550dcbe_27
- gmp=6.1.2=h6c8ec71_1
- gxx_impl_linux-64=7.2.0=hdf63c60_3
- gxx_linux-64=7.2.0=h550dcbe_27
- icu=58.2=h9c2bf20_1
- idna=2.7=py36_0
- intel-openmp=2018.0.3=0
- isl=0.17.1=0
- jemalloc=5.0.1=hf484d3e_1
- libboost=1.67.0=h46d08c1_4
- libdivsufsort=2.0.2=h470a237_2
- libedit=3.1.20170329=h6b74fdf_2
- libffi=3.2.1=hd88cf55_4
- libgcc-ng=8.2.0=hdf63c60_1
- libgfortran-ng=7.2.0=hdf63c60_3
- libprotobuf=3.6.0=hdbcaa40_0
- libsodium=1.0.16=h1bed415_0
- libstdcxx-ng=8.2.0=hdf63c60_1
- mkl=2018.0.3=1
- mkl_fft=1.0.4=py36h4414c95_1
- mkl_random=1.0.1=py36h4414c95_1
- mpc=1.1.0=h10f8cd9_1
- mpfr=4.0.1=hdf1c602_3
- mummer4=4.0.0beta2=pl526hf484d3e_4
- ncurses=6.1=hf484d3e_0
- numpy=1.15.0=py36h1b885b7_0
- numpy-base=1.15.0=py36h3dfced4_0
- openssl=1.0.2r=h14c3975_0
- pandas=0.23.3=py36h04863e7_0
- paramiko=2.4.1=py36_0
- perl=5.26.2=h14c3975_0
- pip=10.0.1=py36_0
- pkg-config=0.29.2=h1bed415_8
- protobuf=3.6.0=py36hf484d3e_0
- psutil=5.4.6=py36h14c3975_0
- py-boost=1.67.0=py36h04863e7_4
- pyasn1=0.4.4=py36_0
- pycparser=2.18=py36_1
- pynacl=1.2.1=py36h14c3975_0
- pyopenssl=18.0.0=py36_0
- pysftp=0.2.9=py36_0
- pysocks=1.6.8=py36_0
- python=3.6.6=hc3d631a_0
- python-dateutil=2.7.3=py36_0
- pytz=2018.5=py36_0
- pyyaml=3.13=py36h14c3975_0
- readline=7.0=ha6073c6_4
- requests=2.19.1=py36_0
- sdsl-lite=2.1.1=hc9558a2_1001
- setuptools=39.2.0=py36_0
- six=1.11.0=py36_1
- snakemake=3.13.3=py36_0
- sparsehash=2.0.3=0
- sqlite=3.24.0=h84994c4_0
- tk=8.6.7=hc745277_3
- urllib3=1.23=py36_0
- wheel=0.31.1=py36_0
- wrapt=1.10.11=py36h14c3975_2
- xz=5.2.4=h14c3975_4
- yaml=0.1.7=had09818_2
- zlib=1.2.11=ha838bed_2