pytest.yml

name: pytest

# Controls when the workflow will run
on: [push, pull_request, workflow_dispatch]
  # Triggers the workflow on push or pull request events but only for the master branch
  # workflow_dispatch allows you to run this workflow manually from the Actions tab

jobs:
  test:
    # The type of runner and python versions that the job will run on
    strategy:
      matrix:
        os: [windows-latest, ubuntu-20.04, ubuntu-latest]
        python-version: ["3.9", "3.10", "3.11"]
        full-test:
          - ${{ contains(github.ref, 'master') || contains(github.ref, 'main') || startsWith(github.ref, 'refs/heads/release') }}
        exclude:
          - full-test: false
            python-version: "3.10"
          - full-test: false
            os: "ubuntu-20.04"
      fail-fast: false
    runs-on: ${{ matrix.os }}

    # Steps represent a sequence of tasks that will be executed as part of the job
    steps:
      # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
      - uses: actions/checkout@v4

      # Install python
      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v5
        with:
          python-version: ${{ matrix.python-version }}

      # Install module
      - name: Install module
        if: runner.os == 'Linux'
        run: |
          sudo apt update && sudo apt install -y build-essential tcl-dev less
          curl -LJO https://github.com/cea-hpc/modules/releases/download/v5.3.1/modules-5.3.1.tar.gz
          tar xfz modules-5.3.1.tar.gz
          cd modules-5.3.1
          ./configure
          make
          sudo make install

      # Install dependencies
      - name: Install dependencies
        run: |
          pip install -e .
          pip install pytest pytest-cov

      # Activate environment and run pytest
      - name: Testing - Linux
        if: runner.os == 'Linux'
        run: |
          set -o pipefail
          source /usr/local/Modules/init/sh
          pytest --cov=. -cov-config=jade.coveragerc --cov-report xml
        env:
          ACCESS_TOKEN_GITHUB: ${{ secrets.ACCESS_TOKEN_GITHUB }}

      # Activate environment and run pytest
      - name: Testing - Windows
        if: runner.os == 'Windows'
        run: |
          pytest
        env:
          ACCESS_TOKEN_GITHUB: ${{ secrets.ACCESS_TOKEN_GITHUB }}
      
      # Upload coverage to Codecov. Do it only for one case of the matrix.
      - name: Upload coverage to Codecov
        # do it only once for python 3.10
        if: matrix.python-version == '3.11' && matrix.os == 'ubuntu-latest'
        uses: codecov/codecov-action@v4
        with:
          verbose: true
        env:
          CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}