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-u parameter should be -U #241

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till-bornemann opened this issue Sep 21, 2023 · 0 comments · May be fixed by #266
Open

-u parameter should be -U #241

till-bornemann opened this issue Sep 21, 2023 · 0 comments · May be fixed by #266

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@till-bornemann
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Hi,

Thanks for providing this nice tool to generate simulated mock communties. While trying out the tool and using one of the code chunks provided at your README

iss generate --ncbi bacteria -u 10 --model MiSeq --output ncbi_reads

I got an error that the -U (instead of the lowercase -u parameter) is required. Changing the -u to -U in the above command fixed the error and now the tools works like a charm. Just wanted to let you know (also since its listed with -u option in the --help of the generate module).

Best,
Till

@ThijsMaas ThijsMaas linked a pull request Jul 5, 2024 that will close this issue
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