Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

mRNA with no exon or CDS #425

Open
dariober opened this issue Aug 21, 2024 · 0 comments
Open

mRNA with no exon or CDS #425

dariober opened this issue Aug 21, 2024 · 0 comments

Comments

@dariober
Copy link
Contributor

Add an assembly from this gff where the mRNA has no exons or CDSs children:

##gff-version 3
ctgA	example	gene	100	200	.	+	.	ID=MyGene
ctgA	example	mRNA	100	200	.	+	.	ID=MyGene.1;Parent=MyGene
##FASTA
>ctgA
cattgttgcggagttgaacaACGGCATTAGGAACACTTCCGTCTCtcacttttatacgat
tatgattggttctttagccttggtttagattggtagtagtagcggcgctaatgctacctg
aattgagaactcgagcgggggctaggcaaattctgattcagcctgacttctcttggaacc
ctgcccataaatcaaagggttagtgcggccaaaacgttggacaacggtattagaagacca
acctgaccaccaaaccgtcaattaaccggtatcttctcggaaacggcggttctctcctag
atagcgatctgtggtctcaccatgcaatttaaacaggtgagtaaagattgctacaaatac
gagactagctgtcaccagatgctgttcatctgttggctccttggtcgctccgttgtaccc

When the mouse hovers on the gene (which may not be visible), we get this error in Firefox:

image

In Chrome the error is:

image
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
Apollo 3
Status: No status
Milestone
No milestone
Development

No branches or pull requests
1 participant
@dariober