Backport changes to STU3 #599
Workflow file for this run
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| name: Integration Tests | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: | |
| - 'stu3/master' | |
| pull_request: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - | |
| name: Checkout repo | |
| uses: actions/checkout@v3 | |
| - | |
| name: Build the latest Spark Docker image | |
| run: docker build . --file .docker/linux/Spark.Dockerfile | |
| -t sparkfhir/spark:stu3-latest | |
| - | |
| name: Build the latest Mongo Docker image | |
| run: docker build . --file .docker/linux/Mongo.Dockerfile | |
| -t sparkfhir/mongo:stu3-latest | |
| - | |
| name: Run integration tests | |
| run: | | |
| cd tests/integration-tests | |
| mkdir -p logs html_summaries json_results | |
| docker-compose up -d spark | |
| docker-compose run --rm --no-deps plan_executor ./execute_all.sh 'http://spark/fhir' stu3 'html|json|stdout' | |
| docker-compose logs spark > logs/backend.log | |
| - | |
| name: Combine test results | |
| if: ${{ always() }} | |
| run: cd tests/integration-tests && ./combine-test-results.sh json_results annotations.json | |
| - | |
| name: Attach test results | |
| if: github.event_name != 'pull_request' | |
| uses: yuzutech/[email protected] | |
| with: | |
| repo-token: "${{ secrets.GITHUB_TOKEN }}" | |
| input: tests/integration-tests/annotations.json | |
| - | |
| name: Archive logs | |
| if: ${{ always() }} | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: logs-stu3-${{ github.sha }} | |
| path: tests/integration-tests/logs/*.log* | |
| - | |
| name: Archive test reports | |
| if: ${{ always() }} | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: html_summaries-stu3-${{ github.sha }} | |
| path: tests/integration-tests/html_summaries/**/*.html | |
| - | |
| name: Archive JSON results | |
| if: ${{ always() }} | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: json_results-stu3-${{ github.sha }} | |
| path: tests/integration-tests/json_results/**/*.json | |
| - | |
| name: Archive annotations file | |
| if: ${{ always() }} | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: annotations-stu3-${{ github.sha }} | |
| path: tests/integration-tests/annotations.json | |
| - | |
| name: Cleanup | |
| if: ${{ always() }} | |
| run: cd tests/integration-tests && docker-compose down |