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Welcome to VCF-SNPS-UTILS

What is VCF-SNPS-UTILS

VCF-SNPS-UTILS is a tool to perform various VCF filtering tasks via command line or as Galaxy Tool!

Originally developed to validate/intersect results from a csv file with vcf files.

VCF-SNPS-UTILS CLI

A vcf_snp_utils cli command line interface.

Options:

  • --home DIRECTORY Changes the folder to operate on.
  • -v, --verbose Enables verbose mode.
  • --help Show this message and exit.

Commands:

  • intersect Intersect SNPs with a CSV file.
  • status Shows file changes.

Having Trouble?

Please see the VCF-SNPS-UTILS Documentation for installation and usage instructions.

Credits

..and all the other contributors and people making VCF-SNPS-UTILS awesome. Please add yourself!