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Add Image/Pixels/Channel/LightSourceSettings #8

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MatteBailey opened this issue Jul 27, 2021 · 0 comments
Open

Add Image/Pixels/Channel/LightSourceSettings #8

MatteBailey opened this issue Jul 27, 2021 · 0 comments

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@MatteBailey
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It is important that for each channel, we capture what laser was used and at what power (eg. 43% for EGFP). This information is captured in CZI at ImageDocument/Metadata/Information/Image/Dimensions/Channels/Channel/LightSourcesSettings, but there are a couple complications:

  1. CZI allows multiple light sources per channel, while OME only allows one.
  2. CZI captures intensity at LightSourcesSettings/LightSourceSettings/Intensity, while Image/Pixels/Channel/LightSourceSettings has an Attenuation attribute. I'm told this is related to intensity, but is different.
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