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It is important that for each channel, we capture what laser was used and at what power (eg. 43% for EGFP). This information is captured in CZI at ImageDocument/Metadata/Information/Image/Dimensions/Channels/Channel/LightSourcesSettings, but there are a couple complications:
CZI allows multiple light sources per channel, while OME only allows one.
CZI captures intensity at LightSourcesSettings/LightSourceSettings/Intensity, while Image/Pixels/Channel/LightSourceSettings has an Attenuation attribute. I'm told this is related to intensity, but is different.
The text was updated successfully, but these errors were encountered:
It is important that for each channel, we capture what laser was used and at what power (eg. 43% for EGFP). This information is captured in CZI at
ImageDocument/Metadata/Information/Image/Dimensions/Channels/Channel/LightSourcesSettings
, but there are a couple complications:LightSourcesSettings/LightSourceSettings/Intensity
, whileImage/Pixels/Channel/LightSourceSettings
has anAttenuation
attribute. I'm told this is related to intensity, but is different.The text was updated successfully, but these errors were encountered: