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In pvdiv_gwas() when type = "logistic", bigstatsr::bigUnivLogRegr() can drop thousands of messages when it has to use glm.fit. This function is using a message2() function to send these messages so it isn't as simple as using suppressMessages() to silence these messages (and ideally replace them with only one message).
Figure out some way to silence these messages in pvdiv_gwas() and pvdiv_standard_gwas().
The text was updated successfully, but these errors were encountered:
In
pvdiv_gwas()
whentype = "logistic"
,bigstatsr::bigUnivLogRegr()
can drop thousands of messages when it has to useglm.fit
. This function is using amessage2()
function to send these messages so it isn't as simple as usingsuppressMessages()
to silence these messages (and ideally replace them with only one message).Figure out some way to silence these messages in
pvdiv_gwas()
andpvdiv_standard_gwas()
.The text was updated successfully, but these errors were encountered: