Add AUCell notebook for scAdvanced pathway analysis #1272

	name: Spell check R Markdown and Markdown files

	on:
	pull_request:
	branches:
	- master

	concurrency:
	# only one run per branch at a time
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: true

	jobs:
	spellcheck:
	runs-on: ubuntu-latest
	name: Spell check files
	permissions:
	contents: read
	issues: write

	steps:
	- name: Checkout
	uses: actions/checkout@v4

	- name: Spell check action
	uses: alexslemonade/spellcheck@v0
	id: spell
	with:
	dictionary: components/dictionary.txt

	- name: Upload spell check errors
	uses: actions/upload-artifact@v4
	id: artifact-upload-step
	with:
	name: spell_check_errors
	path: spell_check_errors.tsv

	- name: Fail if there are spelling errors
	if: steps.spell.outputs.error_count > 0
	run: \|
	echo "There were ${{ steps.spell.outputs.error_count }} errors"
	column -t spell_check_errors.tsv
	exit 1

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