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Biquinho

Visualisation software for imaging mass cytometry (IMC) data.

Screenshot of Biquinho

Dataset used for visualisation is available as part of an open source study and was published by Rendeiro et al.. The exact file used is 20200609_ARDS_1921.mcd.

Features

  • Load .mcd files and visualise optical data
  • Select channels to form RGB composite with user-specified thresholds
  • View multiple IMC acquisitions in single .mcd file at once (multi-camera)
  • Add annotatations and annotate data (e.g. with pencil tool)
  • Load and visualise cell segmentation results